Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 125 5e-24
seq3424 98.7 7e-16
seq2396 91.5 1e-13
seq3388 82.4 5e-11
>seq2787
Length=76071
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| || ||||| || ||||| |||||||| || || || || ||
Sbjct 39733 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 39674
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||||||| ||||| || ||||||||||| || |||||| | ||
Sbjct 39673 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 39614
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| |||||| | || |||| || | || ||| | ||| ||
Sbjct 39613 ATGCCTTCCTTGTCTTGAATTTT-GGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 39555
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || |||||||| || | ||||| ||||||||||||||
Sbjct 39554 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| ||||| | || || || | ||| |||||||| |||||||| || ||
Sbjct 40190 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 40131
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||| || | || || ||||| || || |||||||| | ||| || ||||| | ||
Sbjct 40130 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 40071
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| ||||| |||| |||| || | ||||| | ||| |
Sbjct 40070 AATGCCTTCTTTGTCTTGGATTTTAGCTTTC-ACATTTTCAATTGTGTCAGAAGCTTCAA 40012
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || ||||| || || | ||||| |||||||| ||||||
Sbjct 40011 CTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||| |||||||| || || || | |||| |||||| || || ||||| || ||
Sbjct 41330 ACCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 41271
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || |||| || || || || ||||| | ||| || |||||| | ||
Sbjct 41270 AAGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 41211
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| ||| |||||||| || || ||| ||||| ||| ||||| | ||| |
Sbjct 41210 AATACCCTCTTTGTCTTGGATCTTGGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCAA 41152
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| ||||| | || ||||||||||||||||||
Sbjct 41151 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 41102
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||| || ||| | || | ||| || || ||| || || |||||||| || ||
Sbjct 40418 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 40359
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||||||| || || ||||| || | |||||||||||| | ||
Sbjct 40358 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 40299
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || |||||||| ||||| | || |||| || | || || | |||||
Sbjct 40298 GATGCCCTCTTTGTCTTGGATTTT-AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 40240
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || |||| ||||| ||||| |||||||||
Sbjct 40239 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 40190
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|| || || |||||||| || || ||||| || || ||||| || | ||| || |
Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| || | ||||||||| |||||||| | | ||| |||||| | || | ||| ||||||
Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| || || |||| ||| || | |||||| | || || || | |||||
Sbjct 39829 TCTTGGATCTTTGCCTTCA-CATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGAT 39771
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| ||||| | || || ||||||||||||||
Sbjct 39770 GGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735
>seq3424
Length=494560
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | |||||| || || || | ||| || || || || || || || |||
Sbjct 288837 CCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAG 288778
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|||||||| | || |||||||| |||||||| ||||| | | || |||||| | ||
Sbjct 288777 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 288718
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| ||| || || | || | || | || || | ||||||
Sbjct 288717 ATGCCTTCCTTGTCTTGAATCTT-TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 288659
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| ||||| || ||||| |||||||| ||||| |||||
Sbjct 288658 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | || | |||||| || | ||| || ||||| || || ||||| ||
Sbjct 289293 CCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGAC 289234
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| ||| | || |||| |||||||| |||||||| | | ||| || || | ||
Sbjct 289233 AGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGA 289174
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| |||||| || | ||||| || | || || | |||||
Sbjct 289173 ATGCCTTCTTTGTCTTGAATTTT-TGCCTTAACATTTTCTATTGTATCAGAAGCCTCCAC 289115
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| ||||| || || | || |||||||| || |||||
Sbjct 289114 TTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||||| |||| || | || | ||| ||||| || ||||||||||| ||
Sbjct 289065 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 289006
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||||||| | || || | || ||||| |||||||| | | ||||||||| | ||
Sbjct 289005 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 288946
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || ||||| || ||||||| | || ||||| || | || || | || ||
Sbjct 288945 ATTCCCTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 288887
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || ||||| || || |||||
Sbjct 288886 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
>seq2396
Length=191974
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 70291 TTTTTAACACCCGAAACAATGGCCAGATGTGGATTTTATTATTTGAAACGAGGTGATGAA 70350
|||||| ||||||| || | || || ||| || |||||| || || || ||||||
Sbjct 136238 TTTTTATTACCCGAATCACTCGCGAGGAATGGCTTCTATTATCTGGGCCGCGGCGATGAA 136297
Query 70351 GTTAGATGTGCCTATTGTAAAGTGGAAATAATGCAATGGAAAGAGGGTGATGATCCATCC 70410
|| | || || | ||||||||| ||||| ||| ||||| | ||| || ||||| ||
Sbjct 136298 GTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTTGCGGGCGACGATCCCGCC 136357
Query 70411 GCCGACCACAAGCGATGGGCGCCTCAATGC 70440
|||||| |||| ||||||||||| |||
Sbjct 136358 AAGGACCACCAGCGCTGGGCGCCTCAGTGC 136387
>seq3388
Length=400618
Score = 82.4 bits (90), Expect = 5e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||| | || | ||| || ||||| ||| || ||||| |||||||| ||||
Sbjct 243946 CACCACCTCGGAGTCGGAGCACTAAGTGTAGTGTGGATTCCTTTTGAATGTTGTAGTCGG 243887
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAA 33623
| ||||| || | || ||||||||||| |||||||| |||||
Sbjct 243886 AAAGTGTTCGGCCATCTTCCAATTGTTTACCGGCAAAGATCAA 243844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328686737801280
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