Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_025678.1
Length=32661
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 295 1e-75
>seq3063
Length=7092
Score = 295 bits (326), Expect = 1e-75
Identities = 320/421 (76%), Gaps = 4/421 (1%)
Strand=Plus/Plus
Query 10861 GTTACTGCGTACGAGCAAACTGTGAAAGAGGAAATGAACTTTCAAAAAAGTTTTAACAAT 10920
||||| ||||||||||| || ||||| |||| || |||||||||||||| ||||||||
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10921 CATGTAAGAACTCTAATTGCCAGGGAAGAGGTGGCTATTGGCCTGATGCATCTGTGGGAC 10980
|| || | || || | || | || ||||||||||| || ||||||||||||||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10981 TTCTTGGAAGC-CTATGTA-CAAAACCCCACCAGTAAACCCCTTACCGCTCAGCtttttt 11038
|| || |||| | || | |||||||| | || || || || | || ||||| ||
Sbjct 6793 TT--TGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCC 6850
Query 11039 tAATTGTGCAGCACAGCCGAGACAATGAGACATTTAGGGACGCTTTGTTAAATATTGCTG 11098
| || |||||||||||| | ||||| ||| |||| ||||| || || |||| || | |
Sbjct 6851 TTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 6910
Query 11099 AGCCAGAAGGACGCTGGTTGCTCGATTTAATTAACATTTTGCAAAGTATTGTGGTCCAGG 11158
|||| || || |||||| |||||||||| || |||||| |||| || || ||||| ||||
Sbjct 6911 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGG 6970
Query 11159 AAAGAAGTCTGAGTTTAGCCGATAAGGTGGCAGCCATCAATTATTCTATGCTTAGCTTAG 11218
| | || |||| | || || |||||||| ||||| || ||||| ||||| || | |
Sbjct 6971 AGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGG 7030
Query 11219 GAAAGTTCTACGCACGAAAAATTTACAAAACTCCTTATGTTCCCATTGACAAAGAAGTAA 11278
| ||||| ||||| || || || ||| | || ||||| |||||||| ||||| || ||||
Sbjct 7031 GCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAA 7090
Query 11279 A 11279
|
Sbjct 7091 A 7091
Score = 84.2 bits (92), Expect = 5e-12
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 15693 CGACGCGTGCAGTGGAAAGGGAGAACGGTGCGGCGTATCCTGAGACCGGGAACGACCGTG 15752
|| || || ||||||||||| || || | ||| | || |||| || || |||||
Sbjct 801 CGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACCGTA 860
Query 15753 GTATTTTCTCCCGGAGAACGCTCGTCACGCACGTTCAAGCGGTCCTATGATGAGGTTTAC 15812
|| ||| | ||||| || ||||| | ||||| | |||||| ||||||||||| |||
Sbjct 861 GTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTGTAC 920
Query 15813 GCAGATGAGGATATTCTGGAACAGGCGCTAGAGCAGAGCGGGGAATTTGCATACGGCAA 15871
| || ||||| | || || ||||| |||| |||||| ||||| ||||| ||
Sbjct 921 GGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTACGGAAA 979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104388258244734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |