Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq2314 104 7e-19
seq1218 104 7e-19
seq2265 102 3e-18
seq1351 102 3e-18
seq1331 100 9e-18
seq3095 98.7 3e-17
seq2630 98.7 3e-17
seq2569 98.7 3e-17
seq2344 98.7 3e-17
seq1872 98.7 3e-17
>seq2314
Length=996981
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 824136 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 824077
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 824076 CCGGGTTTCGGC 824065
>seq1218
Length=724029
Score = 104 bits (114), Expect = 7e-19
Identities = 79/91 (87%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 2753 TTGTAC-TGTGTTT--ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCT 2809
|||||| ||| ||| || || ||| |||||||||||||||||| |||||||||||||||
Sbjct 65785 TTGTACGTGTATTTCCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCT 65726
Query 2810 AAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840
||||||||||||||| | |||||| ||| ||
Sbjct 65725 AAAGGTCCCTGGTTCGATCCCGGGTTTCGGC 65695
>seq2265
Length=480565
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 286930 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 286871
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 286870 TCCCGGGTTTCGGC 286857
>seq1351
Length=825266
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 658369 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 658428
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 658429 TCCCGGGTTTCGGC 658442
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 576490 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 576549
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 576550 ATCCCGGGTTTCGGC 576564
>seq1331
Length=931387
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 21294 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 21353
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 21354 ATCCCGGGTTTCGGC 21368
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 25565 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 25624
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 25625 CCGGGTTTCGGC 25636
>seq3095
Length=521029
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 291983 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 292042
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 292043 CCTGGTTTCGGC 292054
>seq2630
Length=1043321
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 400882 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 400941
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 400942 CCGGGTTTCGGC 400953
>seq2569
Length=621203
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 500729 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 500670
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 500669 CCGGGTTTCGGC 500658
>seq2344
Length=252921
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 44635 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 44694
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 44695 CCGGGTTTCGGC 44706
>seq1872
Length=441285
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 188910 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 188969
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 188970 CCGGGTTTCGGC 188981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848853013305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |