Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 122 7e-23
seq3424 91.5 1e-13
seq2396 87.8 1e-12
>seq2787
Length=76071
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| |||||||||||| | ||||| || || ||||| | ||| ||| |
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | |||||| ||||| |||||||||||| | || ||||||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | ||||||| ||||||||| |||||||||||| | || || || ||||||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| |||||||||||||| | || |||||| | | ||| |||| ||
Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 40189
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| |||||||||||||| | ||||| |||||||||||| ||||| ||||||
Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | || ||| ||||| |||||||| ||| | || ||||||
Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| | ||||| | ||| || || ||||| |||||| | || || || ||||||
Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| || || || ||||| || ||| ||||| || | | ||||| ||
Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 40417
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| ||||| |||||||||||||| |||||||||||| ||||| ||||||
Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | | | | || ||| ||||| || || || ||| | ||| || |||
Sbjct 40707 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 40766
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | || |||| ||| || || ||||| |||||| | ||| || ||||||||
Sbjct 40767 CAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 40826
Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468
|| || ||||| || || || || |||||
Sbjct 40827 ATTCAGAAAGAGTCAACCCTGCACTTAGT 40855
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || |||||||| || | || || || ||||| || | || ||| ||
Sbjct 39734 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 39793
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| || | | | ||||| ||| || |||||||| || | ||| |||||
Sbjct 39794 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 39853
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGATTAC 106436
||| |||||||||| ||| || |||||| |||||||| | | | ||| | ||||
Sbjct 39854 ACAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTG--ATTAT 39911
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| || ||||| |||||||| ||||||||||||||| || | || || ||
Sbjct 39912 AATATTCAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCGTGGCGG 39961
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
|||||||| || ||||| |||||| | || || || |||||||| ||||| |||||
Sbjct 39504 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 39563
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
|||| || ||| | || ||| |||||| ||||| |||||| | || |||
Sbjct 39564 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 39623
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||| | | |||| || || || ||||| ||||| ||| | || ||
Sbjct 39624 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTAT 39683
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
|| || |||||||||||||| || || || ||||||
Sbjct 39684 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTG 39719
>seq3424
Length=494560
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||||||||| || || ||| ||||||||||||| || || ||||| || ||
Sbjct 288838 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 288897
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| |||||| || ||||| || | ||| |||||
Sbjct 288898 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 288957
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436
||||| ||||||| ||| || || || | |||||| | | ||||| ||||||
Sbjct 288958 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTAC 289015
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||||| || ||||||||||| | || ||||| | || | |||| |||
Sbjct 289016 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 289066
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| ||||| || ||| ||||||||||||| || || ||||| || |||
Sbjct 289750 AATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 289809
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
|| | | | | || || |||||| || || |||||| | || || ||
Sbjct 289810 TGACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 289869
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436
|||||||||||||| ||| || || ||| | || ||| | | ||||| || |||
Sbjct 289870 ACAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTAT--CAGACTAC 289927
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTA 106469
|| || || ||||||||||| |||||||||||
Sbjct 289928 AATATTCAGAAAGAATCTACTTTACATTTAGTA 289960
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| ||||| || ||| ||||||||||||| || || ||||| ||| |
Sbjct 289522 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 289581
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || || |||||| || ||||| ||| | ||| |||||
Sbjct 289582 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 289641
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436
||||| ||||||| ||| || || || | |||||| | | ||||| || |||
Sbjct 289642 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 289699
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| || || || |||||||| | ||| | ||| || || | |||| |||
Sbjct 289700 AATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGGA 289750
>seq2396
Length=191974
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697
|| || || |||||| |||| |||| || ||||| |||||||||||||| ||||| |||
Sbjct 136265 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 136324
Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757
|| ||| ||| | | ||||||||| || || || || | || |||||||| ||
Sbjct 136325 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAG 136384
Query 99758 TGCCCGTTTATGCAGC 99773
||||| || ||| ||
Sbjct 136385 TGCCCTTTCTTGCGGC 136400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402308471283872
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