Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3829 129 8e-24
seq3103 127 3e-23
seq3494 91.5 2e-12
>seq3829
Length=1076
Score = 129 bits (142), Expect = 8e-24
Identities = 171/234 (73%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| |||||||| || || ||||| |||| ||| |||| |||| |
Sbjct 742 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGCG 795
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| ||
Sbjct 796 ATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--GT 853
Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
||| || || | || ||||||| | ||||||| | | ||| | |||||| |||
Sbjct 854 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 913
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || | ||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 914 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 967
>seq3103
Length=1060
Score = 127 bits (140), Expect = 3e-23
Identities = 172/235 (73%), Gaps = 11/235 (5%)
Strand=Plus/Plus
Query 724911 ATCTACAA-GGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTC 724969
|||||||| ||||||||| || || ||||| |||| ||| |||| |||| |
Sbjct 117 ATCTACAAAGGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGC 170
Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029
||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| |
Sbjct 171 GATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--G 228
Query 725030 TCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
|||| || || | || ||||||| | ||||||| | | ||| | |||||| ||
Sbjct 229 TCGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCC 288
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | || | ||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 289 GTGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 343
>seq3494
Length=1266558
Score = 91.5 bits (100), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| ||| | |||||||| ||||| || |||| ||| || | ||| |
Sbjct 402116 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCT 402063
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| || ||||||||||| || | || || |||| |||||||
Sbjct 402062 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTTGAACGTATCGCGGCCGAGGCGTCC 402003
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || ||||||| | |||||| || | || | |||||| ||||
Sbjct 402002 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 401943
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || | | |||||| || || | ||||| ||| |||||| ||
Sbjct 401942 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCTGTCAGCGAGGGAAC 401893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177395589030058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |