Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 111 1e-19
seq3424 105 6e-18
seq1305 89.7 5e-13
>seq2787
Length=76071
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | || ||| || ||||||| ||| ||||||||||| || ||||| |
Sbjct 39961 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 39902
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || || || || || ||||| || | || ||| || || | |||
Sbjct 39901 AATGTACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 39842
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| ||||| ||||||| ||||| | || | | |||||| || || |||
Sbjct 39841 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACC 39782
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | ||||| ||||| || || | ||| || ||||| ||||||||||
Sbjct 39781 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATTC 39733
Score = 104 bits (114), Expect = 2e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | ||| ||||| || | ||| || |||||||| || || || |
Sbjct 39735 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 39676
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || |||| |||| ||||| || || || ||||| || || || || | ||
Sbjct 39675 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 39616
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || |||||||| ||| ||| |||| | | || | | || ||| | |||
Sbjct 39615 GAATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 39557
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| |||| || || ||||||||||| | ||||||||||| ||||||||| ||
Sbjct 39556 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 39503
>seq3424
Length=494560
Score = 105 bits (116), Expect = 6e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | | | || |||||| || || ||| ||||||||||| || ||||| |
Sbjct 289295 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTG 289236
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || |||||||| || || ||||| || | || ||| ||||| | ||
Sbjct 289235 ACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAG 289176
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || || |||| | ||| ||||| ||| | | || | | || || | |||
Sbjct 289175 GAATGCCTTCTTTGT-CTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCC 289117
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| ||||| ||||| || |||| || || |||||||| |||||||
Sbjct 289116 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATTC 289065
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || | ||| || ||||| || ||| |||||| || || || || || |
Sbjct 290207 TTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCG 290148
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| || || | || ||||| ||||| || || || |||| | || || || | ||
Sbjct 290147 ACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290088
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| || |||||||| |||||| ||| | | || | | ||||| | ||||
Sbjct 290087 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCA 290028
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| |||| || || ||||| || ||||| ||||||||||| || |||||
Sbjct 290027 CTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | ||| || ||||| || ||| |||||| || || || || || | |
Sbjct 290433 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290374
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || || || |||| | || || || | ||||
Sbjct 290373 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290314
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||| || |||||| ||| | | || | | || || | |||||||
Sbjct 290313 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACC 290254
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||| ||||| ||||| || |||| || || ||||| || |||||||
Sbjct 290253 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATTC 290205
>seq1305
Length=286731
Score = 89.7 bits (98), Expect = 5e-13
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| || | ||| || || | || || || || ||||| |||||
Sbjct 24794 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 24853
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
||||| || |||||||| | |||| | ||||| || ||| ||| || || | | |
Sbjct 24854 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGAT-TTTAGCTTTTACATT 24912
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | || ||| | |||||||| | || || ||||||||||| | || || ||
Sbjct 24913 TTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 24972
Query 35725 AAATATCTGCATTCTG 35740
|| || |||||| ||
Sbjct 24973 GAAAATTTGCATTGTG 24988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450769319129720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |