Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 603 1e-167
seq1351 98.7 1e-15
>seq3345
Length=207354
Score = 603 bits (668), Expect = 1e-167
Identities = 1112/1613 (69%), Gaps = 23/1613 (1%)
Strand=Plus/Minus
Query 68354 TTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGAT 68413
|||||||| | || || | ||||||||||| | | ||| |||||||| |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 68414 AGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG 68473
||||||| || ||||| | ||| | |||| ||| |||||| || || |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 68474 AATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTC 68533
||| | || | || | ||| || || | ||||||||||| || || ||||||||||
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 68534 TATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAAT 68591
|||| || ||||| | ||| | || | | ||| ||||| | || | || ||||
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 68592 CTGTTTGATATCATCTGGAAGGCT---CGTATTTTGAATGGATCCACCATCGGATATAAT 68648
|| || || || | |||| | | | ||| || |||||| | | |||||||
Sbjct 113157 CTCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAAT 113100
Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708
| ||| || || || |||| |||||| | | || ||| | | || ||||| |
Sbjct 113099 AAGATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 113040
Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768
|| |||| ||||||| |||||||| ||||| | ||||||||| ||| | ||
Sbjct 113039 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 112980
Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828
||| | ||||||| | || || |||||||| ||||| || ||||| ||||| || || |
Sbjct 112979 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTAT 112920
Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
||||| | ||| | | ||||||| || || || ||||| || ||| |||||
Sbjct 112919 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCA 112860
Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948
||| || | || | ||| | ||| || || || || || | ||||| |
Sbjct 112859 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGAC 112801
Query 68949 TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATG 69007
||| || |||||| || | ||||| | |||||||| ||||||||| || |||||||
Sbjct 112800 TCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATG 112741
Query 69008 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGA 69067
|||| |||||||||||||| || || | | ||||||| | ||||| ||| |||
Sbjct 112740 CACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 112681
Query 69068 ATGGATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
| || | | | | | | ||| |||||||||| |||||||| |||||||| ||||||
Sbjct 112680 A-AGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 112622
Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186
||||||||| |||||||| ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 112621 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 112562
Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|| || | |||| | ||| | || | || |||| ||| ||||| |||||
Sbjct 112561 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTA 112502
Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCA--T 69304
|| | ||||||||| || ||||||| || || || || || ||||| || ||| |
Sbjct 112501 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCT 112442
Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364
| | || ||||| | | ||| || || ||||| |||||||| ||||| || ||||
Sbjct 112441 TCTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 112384
Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424
||| |||||||||||| ||||||| || ||||| || | || | || |||||||| |
Sbjct 112383 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 112324
Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAA 69483
| | || | ||| ||||| || ||||| | || || | | | | || || || |||
Sbjct 112323 CTACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATAA 112267
Query 69484 --CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA-TCA 69540
|| || |||| |||||||| | |||||| ||| ||||| ||| || || || |||
Sbjct 112266 ATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCT-CCAAAGCAGTCA 112208
Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600
| | |||||||| |||| |||||||| | ||| || ||||| | | |||| |
Sbjct 112207 GCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 112148
Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660
|||||||| ||||| || ||||| | || ||| || ||||| | ||| |||||||
Sbjct 112147 TTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 112088
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| || || || || || | ||| | || || | || || | |||||| || |||| |
Sbjct 112087 TTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAA 112028
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| ||||| | | || || ||||| ||||| || ||||||| ||||||||||| ||
Sbjct 112027 TAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 111968
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||||| ||||||| ||| || | | |||||| || ||||| || |||| || |||
Sbjct 111967 TTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 111908
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
|| || | || | || || |||||| || || || |||||| |||
Sbjct 111907 GAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 111848
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953
| ||||| |||| || || ||| | ||||| || |||||||| ||| ||||
Sbjct 111847 AATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 111795
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404
|| || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||
Sbjct 110521 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 110462
Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464
||||| | ||| || ||||||||| ||||| ||||||| |||| | || ||||
Sbjct 110461 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 110402
Query 70465 GTAACTCCGTTATATA 70480
|| || || |||||
Sbjct 110401 GTTACACCAGAATATA 110386
>seq1351
Length=825266
Score = 98.7 bits (108), Expect = 1e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | |
Sbjct 602570 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 602629
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211
|||||||| ||||||| ||||| || |||||||| | | |||||||
Sbjct 602630 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 602678
Score = 89.7 bits (98), Expect = 7e-13
Identities = 153/220 (70%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||| ||| ||| | ||| ||| || || | ||| ||||| ||||| || ||||
Sbjct 601394 CCTCATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 601453
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| | ||||||||| | |||||| || || || || || || || ||||||||||| |
Sbjct 601454 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAG 601513
Query 39759 CAACAAGTCTCTCTCCGTAACTTG-TATCATTATG--TATCCACTTCTGTGCCCAATCAG 39815
||| | | ||||| | | | | || | || ||||||| ||||| || |
Sbjct 601514 CAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 601573
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
| |||||||| ||||| || | ||||| || ||||| ||
Sbjct 601574 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAA 601613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686871801374760
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