Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_027705.1 Length=33090 Score E Sequences producing significant alignments: (Bits) Value seq3063 158 3e-34 >seq3063 Length=7092 Score = 158 bits (174), Expect = 3e-34 Identities = 285/417 (68%), Gaps = 0/417 (0%) Strand=Plus/Plus Query 12836 ACCACGTATCAGCAGACCGTGAAGGAAGAAAAGAACTTTCAGCAAAGTTTCAACAACCAC 12895 ||| |||| ||||||| ||||| | || | |||||||| |||| || ||||||||| Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 12896 GTCCGTACTTTAGTAGCGAGACAGGAAGTGACTGTGGGACTGATGCACCTTTGGGATTTT 12955 || || || | || ||| | |||| ||| || | ||||||||||| || ||||| ||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 12956 GTGGAGGCCCTCACTGAAAACCCTTCCAGCCGCTCTCTCACTTCCCAACTTTTCCTTATA 13015 || || || ||||||| ||| | |||| | || || ||||||||| Sbjct 6796 GTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 6855 Query 13016 CTCCAACATTCTCGCGACGACGGTGTCTTTCGCGAGTCTCTCCTTCACATCGGGGATCCG 13075 | || || | ||| ||| | || | || | || || |||| | || || Sbjct 6856 GTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 6915 Query 13076 GATGGGCGTTGGCTACTCGATCTCATTAACGTTCTACACACTATCGTGGTGCAGGAGCGA 13135 || || || ||||| |||||| | || ||| |||| || | || |||||||||||||| Sbjct 6916 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGC 6975 Query 13136 AACCTCAAACTGGCCGAAAAGGTGGCAGCCATCAACTACTCTGTTCTCACATTGGCTAAA 13195 | | | | ||||| || |||||||| ||||| ||||| || | |||| ||| || Sbjct 6976 AGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAG 7035 Query 13196 TTTTATGCGCGAAAGATCTATCACAACTATTTTGTGCCTATGGACAAAGAGGTGAAG 13252 ||||| || || ||||| || || | | || || || || ||||| ||||| ||| Sbjct 7036 TTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105760987999416