Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq3063 91.5 3e-14 >seq3063 Length=7092 Score = 91.5 bits (100), Expect = 3e-14 Identities = 268/411 (65%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 10117 GCTTATGAGCAGACAGTGAAGGAGGAGGTCAACTTTCAGACCTCTTTCAACAACACAGTC 10176 || || |||||||| ||||| ||||| | |||||||| | || |||||| || Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738 Query 10177 AGAACCCTGCTGTGCCGGGAAGAGGTGGTGGTGGGCATGATGCATCTGTGGGATTTTGT- 10235 | || || || || || ||||||| | || |||||||||||||||| ||||| Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTTGTA 6798 Query 10236 -GCAGTCTTACTTGGAAAATCCCCTGAGCAAGGCCCTGACGGCCCAGTTGTTTCTCATTG 10294 || || | |||| || |||||| | || | ||| ||| |||| || || | Sbjct 6799 AGCGCGCT--GGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAG 6856 Query 10295 TGCAACACTGTCGGGACGAGGGGGTGCTCAGAGAGACCCTCCTCAATATCGCCGACCCCG 10354 |||| ||| | ||||| | | || |||| || | || || || || | || |||| Sbjct 6857 TGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 6916 Query 10355 AGAGCAGTTGGCTGGTTGACCTTTTGAACCTGCTGCAGACGATCGTGGTGCAAGAAAGGG 10414 || || | |||||| | || | | ||| | ||||||| || |||||||| || | Sbjct 6917 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCA 6976 Query 10415 GGCTTTCCGTGGGGGAGAAGGTGGCGGCTGTAAACTACTCAGTGATCACCCTCAGCAAAC 10474 | | | ||| || |||||||| || | ||||| || || ||| || |||| Sbjct 6977 GCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGT 7036 Query 10475 ACTATGCCAGAAAAATCTTCAACTCGGTCTTTGTGCCCATCGACAAGGAGG 10525 || ||| | || || | | | | | || ||||| |||||||||| Sbjct 7037 TTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGG 7087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101786791366980