Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 102 6e-17
seq3482 93.3 3e-14
>seq1351
Length=825266
Score = 102 bits (112), Expect = 6e-17
Identities = 142/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||||||||| ||||| |||||||| || ||||||||||| | | | ||||
Sbjct 602444 GACTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCAT--GTTT 602387
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || ||||| || ||| | |
Sbjct 602386 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTTCAC 602327
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||| ||||||||||| || ||||||
Sbjct 602326 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 602267
Query 43974 TTCATTCGGAAATGTAC 43990
||||||| || ||||||
Sbjct 602266 TTCATTCAGAGATGTAC 602250
>seq3482
Length=277542
Score = 93.3 bits (102), Expect = 3e-14
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | ||||| ||| || ||
Sbjct 266317 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGTGTTAAGCCCTC 266376
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149
| ||| |||||||| || | || ||| ||| |||||||| |||||||||||| ||
Sbjct 266377 GCATGTAAACGGCATATC-TTCTTGTCGATACTGGATTCCACAGGTTCCTTTTTGACCGT 266435
Query 115150 TAAACGATGCAAATTTATCACCAAT 115174
| || ||||| ||||| |||||
Sbjct 266436 GACGTGAAGCAAACTTATCTCCAAT 266460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397435127225545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |