Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 266 3e-66
seq3345 215 4e-51
seq2787 161 8e-35
seq3424 104 2e-17
>seq3463
Length=282612
Score = 266 bits (294), Expect = 3e-66
Identities = 790/1207 (65%), Gaps = 11/1207 (1%)
Strand=Plus/Plus
Query 49337 ACCCAGACCTTGATTCATAGCGTTTAACAAGTCGCCGTTGTCGGCGTCAATTTCCCAAGC 49396
||| ||||| ||||| || || | | ||| ||||| || ||||| | |||||||||
Sbjct 181822 ACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGC 181881
Query 49397 AAACAGTCCGCCCAGATTCAAATCCAGCACGTATCGACTCTTGTCGACTACCGAGTCGA- 49455
||| || || || || || || || ||| || ||| || | ||||| || |
Sbjct 181882 AAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGA-TCTAG 181940
Query 49456 CGCTATCGTAACTGATCAAG-TCACCGGTGGACGCTTTAAAAACGTACGCCGCTTTAGCG 49514
| |||| || | | |||| || || || || | | | || ||||| | |||| |||
Sbjct 181941 CATTATCATAGGTTA-CAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGCG 181999
Query 49515 ACAGTGTCGTATGTGTACTTGTATTGCGCCGGCAACAAACTGTTTA-CAATTTGCCTGTA 49573
||| ||||||| | ||| | | ||| | | | | || |||| | ||| ||
Sbjct 182000 ACATTGTCGTAATGGAACTCCCACTT-GCCTTGAGCGATTTCATTCGCAATCTCCCTATA 182058
Query 49574 ATCCACTACGCCGTCCTCCCAAGTGCCCACGACAGGACCACCGGCAACGCCTGTGAACGG 49633
|| || || ||||| | |||||| || |||||| ||| || ||||||||| ||
Sbjct 182059 GTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGG 182118
Query 49634 GTTGTCATCTGTGTAATCGTCGACTGCGGTCCAACCGCGGCCGTACATTGCCACTCCGAT 49693
||| ||| ||||||| | || | |||||||| || || ||||| || || || |
Sbjct 182119 AATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTAC 182178
Query 49694 GACAATTTTTTCGCTAGCCACGTTCTGTTTGAGCAGCTCGCGAACAGCGGTGTCAGTGGT 49753
||||| || | | ||| ||| |||| | || || ||||| ||
Sbjct 182179 TACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGT 182238
Query 49754 GTACAGTTCGCCGGCGTTCCACAGCGGCGCATACAAATTGGTTTGGTAACCTAAATCGAC 49813
||| ||| || |||||| ||||| ||||| ||||| | || | | | |
Sbjct 182239 GTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGTGTC 182298
Query 49814 ATTGGACCAAGCACCTTTAAAATCGTACGACATTAGAAAAATTTGATCTAAATATTGCTG 49873
||| ||||| || || || || ||||| ||| | ||||| ||||| | ||| | ||
Sbjct 182299 ATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTG 182358
Query 49874 GGCGCTAGCATAGTCGACCAACTCGATTTTGTCATAGCCGGCGCCAATAGCTGAAGTCAA 49933
|| | ||||||| || | | |||||| || | || |||| |||||| ||||| ||
Sbjct 182359 AGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAA 182418
Query 49934 AAGCAGTTTACGACCGGTCTGCTCTTGCACTTCGTCTAACATTTTGCGCAACTCTTTAAG 49993
||| ||| ||| || | ||||| | ||| | || || ||||| |
Sbjct 182419 TTCGTATTTCTTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCAT 182478
Query 49994 CAAAATCACGTACGTGGCACCGTCATTGTCAACATCTCCCAAAATC-GGGTTGGCGCCTT 50052
|||| | || || |||| || || | | | || | || ||||| || ||||
Sbjct 182479 CAAACTTACATAACAATCACCATC-TTCTGGGC---TACCGAGGTCAGGGTTAGCACCTT 182534
Query 50053 TGCCGCCCGGAAACTCCCAGTCAATGTCGACGCCGTCGAAAAATTTCCAAACTTGTAAAA 50112
|||| || || |||||||| || || || || || ||||| |||||||| | | | ||
Sbjct 182535 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAA 182594
Query 50113 ATTCGCGAACCGACTCCACAAACACTTTTCTGATCGCGTCATCGTGCATGAAAAAGAATG 50172
| || || |||| |||||| | |||| | | | || | || ||||| |
Sbjct 182595 ACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAG 182654
Query 50173 GATCCGACAGAGTCCAACCGCCGATCGAAGGCAAAATTTTAATGTGCGGATGCGCCTTTT 50232
|||| | || ||||| || || || || || | ||| || | | || | || | ||
Sbjct 182655 GATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 182714
Query 50233 TGACGGCCATTAACTGACCAAAATTGCCTTTATACGGTTCGTTCCACGCGGACACTCCTT 50292
| | | |||||| || ||||| |||||||| || || |||||||| | |||| |||||
Sbjct 182715 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCTT 182774
Query 50293 TTTGCGGCTTCTGTATGGCGGCCCAAGGGTCGTGTATGGACACTTTAAAATCTTCCCGTC 50352
|||| || || |||| || ||||| || ||||| || || ||||| || || || || |
Sbjct 182775 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGC 182834
Query 50353 CCGCACACGATCGCTGCAACGCCTCGAAACTGCCGGTGATGGTTTTGAGGCTGTCGTTGA 50412
| ||| || ||||| | || | ||||||||| ||| ||| | || || ||||
Sbjct 182835 CGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGA 182894
Query 50413 TACCGTCGCCGCCGCAAATGGGAATGAAACCGTACAACAGATGAGTTAAATTTGGCACAG 50472
| ||||| ||||||||||| || || || ||||| | || |||||| | ||| || | ||
Sbjct 182895 TGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAG 182954
Query 50473 GCACTTTGTCCGCTGGAAAGTTGCGACCGTATACTCCCCACTCAACAAAGTATGCCGCCA 50532
| | ||| | || || || | | || || ||||| || || ||||| || |||
Sbjct 182955 GTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCA 183014
Query 50533 CGACTTT 50539
| |||||
Sbjct 183015 CAACTTT 183021
>seq3345
Length=207354
Score = 215 bits (238), Expect = 4e-51
Identities = 1085/1704 (64%), Gaps = 66/1704 (4%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || || ||||| ||||| | || || || ||||| || || ||||| |||
Sbjct 113386 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 113327
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGCTGC-ACATT-GTTTGG--TAA 130519
||||| | || ||||| ||| | ||||| || | || | |||| ||
Sbjct 113326 GTTTTTAAACCCATTTT----CCA--AGCGTGGAAATGAATCGACGTAAGTTTTCCATAG 113273
Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579
|| |||| || || |||||| | ||||| ||| || |||||||| || || ||
Sbjct 113272 TTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCA 113213
Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638
|| ||||| | | | ||| ||| | | |||||||| |||| ||||| | ||| ||
Sbjct 113212 GCTGCCATCTGTATGGATGTTTTCAGTGAA-ATCTCCCATACGGTTTTGTACAAATCTCT 113154
Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698
|| | ||| || || |||| ||| | || |||||| |||||| ||
Sbjct 113153 TATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATT 113094
Query 130699 GCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758
|||| || ||| |||| || | | | ||| | | | ||||| || |
Sbjct 113093 TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCAC 113034
Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818
| |||| || |||| | ||| | ||| |||||| || || || ||||||||
Sbjct 113033 TACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAA 112974
Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878
||||| ||||||| | |||||||| |||| || || ||||| || | |||||
Sbjct 112973 AGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAG 112914
Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938
|||||| || | ||| || | | || ||| || | || |||| ||||| ||
Sbjct 112913 AGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTC 112854
Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998
||||| | |||| |||||||||| | || || || |||| || || |||||
Sbjct 112853 TGTAGGAGTT---TTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 112797
Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058
|| | | ||| ||||| ||| | || |||||||| || || ||
Sbjct 112796 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACC 112737
Query 131059 GTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGG 131118
|||||||| ||||| ||||||| ||| | || | |||| | || |||||||
Sbjct 112736 ATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA 112677
Query 131119 AAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATG 131178
|| | |||| || | ||| || ||||| | ||||| | |||| || | ||||||||
Sbjct 112676 AATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATG 112617
Query 131179 TTTTAAATTACA--TTTACGCGAACATTCGGTG---GGATAAAGGTTAATGTCAATTATT 131233
| | | ||| | ||| || ||| | | ||||||| |||| ||||| | |
Sbjct 112616 TCTCATATTTGAAGTTTTTGC-----TTCAGGGACAGGATAAAAATTAACATCAATAACT 112562
Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293
||||||||||| | |||||| | ||||| ||| ||||| | |||| ||| |
Sbjct 112561 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTA 112502
Query 131294 CCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353
| |||| ||||| || | ||| || || || || || |||||| |
Sbjct 112501 TTATTTTC------AACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACT 112448
Query 131354 TCGTCAT---AATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTG 131410
|| || | || | || || |||| || | ||| | ||| || | || || |||
Sbjct 112447 TCATCTTCTGAAGTG---TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 112391
Query 131411 CCCAAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGT 131469
|| | ||||| |||||| || || | | ||| | ||||| |||| |||||| || ||
Sbjct 112390 CCAAGATTTTTTTGATTACTCTT-TCTGTTACAAGCATCCTTATACAACATGTATGGTGT 112332
Query 131470 GCCCGTTTCGACTTGAGTTTCAATAATGTA--TCGAAAGAGTTTTCGAGCAGACAATTGA 131527
|| || || ||||| | ||| ||||| | || | | | | || |||| | |||
Sbjct 112331 ACCAGTCTCTACTTGGGCTTCTATAATTGACTTCCATA-ACTCTT-GAGCTCTGACTTG- 112275
Query 131528 TATTTGTATTGGCCGCGTTT-TTCGTAAT-TTTCGTACAACGT--TTCAAAGTTTTGGCC 131583
|| ||| || ||| ||| | || ||| | | | || |||||| | | ||
Sbjct 112274 ---TTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCC 112218
Query 131584 AAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTG 131643
||| | | | ||||| || |||||||| || ||| || | | ||
Sbjct 112217 AAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTT 112158
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||| |||| |||||||||| ||| || | |||||| || || ||||| ||||||||| |
Sbjct 112157 TTCTACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCT 112098
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763
| ||||| ||||| | | || || |||| || || || || ||||| ||||||||
Sbjct 112097 CATTTCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCA 112038
Query 131764 GGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACATG 131817
|| || ||||| | || | ||| || |||| || || ||||||| ||||
Sbjct 112037 AGGCTCTAAATAAATCGCAAATGCACCGGGACGTTTG---TTTCCACCTTGATCTACATA 111981
Query 131818 ACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGT 131877
| | | ||||| || || | |||||| ||| | | ||| || | | ||||| ||
Sbjct 111980 TCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGT 111921
Query 131878 GCTCTTAATGTAGCTGCCATTGGCTCTGAT--TTTGTGAACGTTGAGTCCAATACCTCCG 131935
|| ||||| || | |||||||| |||| | || | || || || ||
Sbjct 111920 GCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGT--AAACCTATGCCACCA 111863
Query 131936 CCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCC 131995
| ||||||| |||| ||| |||| ||| ||| | | | |||||||| | ||| ||
Sbjct 111862 GCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCG 111803
Query 131996 GCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAAC 132055
| || | | | ||||| ||||| | ||| | | |||| | ||||| ||
Sbjct 111802 TCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAAT 111743
Query 132056 AATGTGGGGCTGGCGTGTGTAAAA 132079
| ||| ||||| || |||||||||
Sbjct 111742 AGTGTAGGGCTTGCATGTGTAAAA 111719
>seq2787
Length=76071
Score = 161 bits (178), Expect = 8e-35
Identities = 176/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || || || ||||| || || || || || ||||| ||||||||||||||
Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | ||| | || || ||||| || || ||| |||||||||| |||||||| || ||
Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||||||| || ||||||| ||| | |||| | |||||||| || |||||||
Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
|||| || |||| ||| || ||||| || || |||||||| |||||| || ||
Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATACCTCCT 41096
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| |||| ||| ||||| | ||||| |||||||| || |||||||| |
Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | ||||| ||||| || || || | || ||||| |||||||| || ||
Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| |||||||||||| ||||| || | |||| | ||||| | |||| || ||
Sbjct 40525 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGC-TCCAC 40467
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||||||| ||||| || || || || ||||| |||||||||
Sbjct 40466 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 40418
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || || | ||||||||| ||||||| ||||| || ||||||||||| || || | |
Sbjct 39961 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 39902
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| | || | ||||| || ||||| || || |||| || | ||||||||| || ||
Sbjct 39901 AATG-TACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGG 39843
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||||||| || |||||| |||| |||| | |||||| | | || ||
Sbjct 39842 AATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTAC 39783
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| ||| || | ||| || || ||||| || |||||||| |||||
Sbjct 39782 CTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | || | |||||| || | || || ||||| || ||||||||||| |
Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | ||||| || |||||||| ||| | || ||||| |||||||| || ||
Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| || || ||||| ||||| ||| | |||| | ||||||| |||| |||||
Sbjct 40981 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGC-TCAAC 40923
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | |||||| | ||| || || || ||||| ||||| ||||||||
Sbjct 40922 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 40875
Score = 120 bits (132), Expect = 3e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089
|| || | ||| || || || ||||| |||||||| || |||||||| || | ||
Sbjct 40180 AAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGA 40121
Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149
| ||||| | || || || || |||| ||||| ||||||||||| || | || |||
Sbjct 40120 CCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCT 40061
Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209
|| || ||| || ||||| |||| | ||||| | ||||||||||||| |||
Sbjct 40060 TTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTA 40001
Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | ||| || || || ||||| |||||||||||||||
Sbjct 40000 ATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||||||||| || | ||||| |||||||||||||| ||||| | |||| ||
Sbjct 39721 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCG 39662
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | || || || ||| |||| | ||| |||||||| || || | || || ||
Sbjct 39661 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 39602
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| || ||| ||| | |||| | ||| || | | ||||||||| | ||| ||
Sbjct 39601 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 39542
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| ||||| || |||||||||||||| |||||
Sbjct 39541 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507
Score = 107 bits (118), Expect = 2e-18
Identities = 156/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
||| ||||| || ||||| |||||||| || || ||||| || |||| | || ||
Sbjct 41540 TACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTC 41481
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
| ||||||||| || | |||||||||||||| || || || | ||||| |||||
Sbjct 41480 TAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTG 41421
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATT 27216
|||||| || | |||| | |||||| | |||| || || || | ||| || | |
Sbjct 41420 GATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGC-TCCACCTCCAAAGTGATGGTCT 41362
Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
| || || ||||| || |||||||| |||||| || ||
Sbjct 41361 TCCCAGTAAGAGTCTTAACAAAGATCTGCATACCTCCT 41324
>seq3424
Length=494560
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || ||||| || ||||| || || || ||||| ||||| || |||| |
Sbjct 290193 CGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCA 290134
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| || || || |||||| |||| || | |||||||| || || | || || ||
Sbjct 290133 TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 290074
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||| || | |||||| ||||| | || || ||||| | || |||
Sbjct 290073 TCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATA 290014
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| |||||| |||| ||||||||||| ||||||||
Sbjct 290013 GTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | || ||||| ||||| || || || || || || |||||||||||||| | |
Sbjct 289521 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 289462
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| ||| | ||||| ||||| || || || |||| || | || ||||| || ||
Sbjct 289461 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289403
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||||||||| || || || | |||| | || || | ||||| ||
Sbjct 289402 AATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 289343
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | ||| |||| ||||| ||||| || || ||||| ||||||||
Sbjct 289342 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | || ||||| ||||| ||| || ||||| || || |||||||||||||| | |
Sbjct 289749 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 289690
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| ||| | ||||| ||||| || || || |||| || | || ||||| || ||
Sbjct 289689 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289631
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||||||||| || || || | |||| | || || | ||||| ||
Sbjct 289630 AATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 289571
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | || |||| ||||| ||||| || || ||||| ||||||||
Sbjct 289570 TTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289523
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTT 27096
||| |||||||| ||||| ||||| |||||||||||||| | | || | || | || |
Sbjct 289960 TACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTG-TACGTCCATCCT 289902
Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156
| || || || || || |||| || | ||||| || || || | || || |||||
Sbjct 289901 CAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTT 289842
Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216
|| ||| || | |||| | ||||| | || |||||||| || || |||| |
Sbjct 289841 GAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCT 289782
Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| ||||| || |||||||| ||||||||
Sbjct 289781 TGCCAGTCAGTGTCTTCACAAATATTTGCAT 289751
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| ||||| || || ||||| || ||||||||||| || || || | || |
Sbjct 289281 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 289222
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| |||||||| || || |||| || | |||||| || || || | || |||||
Sbjct 289221 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 289162
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| || || || | |||||| || || | || || ||||| | || |||
Sbjct 289161 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACTTCCAATGTGATA 289102
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| |||||| ||||| || || ||||| ||||||||
Sbjct 289101 GTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | || ||| | ||| | || || ||||| ||||| ||||| ||||| || | |
Sbjct 289065 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 289006
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| ||| | ||||| ||||| || || || |||| || | || ||||| || ||
Sbjct 289005 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 288947
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||||||||| || || ||| | |||| | || || | | |||||
Sbjct 288946 AATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 288887
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | ||| |||| ||||| ||||| || || || || ||||||||
Sbjct 288886 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424912084171608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |