Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3463 266 3e-66 seq3345 215 4e-51 seq2787 161 8e-35 seq3424 104 2e-17 >seq3463 Length=282612 Score = 266 bits (294), Expect = 3e-66 Identities = 790/1207 (65%), Gaps = 11/1207 (1%) Strand=Plus/Plus Query 49337 ACCCAGACCTTGATTCATAGCGTTTAACAAGTCGCCGTTGTCGGCGTCAATTTCCCAAGC 49396 ||| ||||| ||||| || || | | ||| ||||| || ||||| | ||||||||| Sbjct 181822 ACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGC 181881 Query 49397 AAACAGTCCGCCCAGATTCAAATCCAGCACGTATCGACTCTTGTCGACTACCGAGTCGA- 49455 ||| || || || || || || || ||| || ||| || | ||||| || | Sbjct 181882 AAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGA-TCTAG 181940 Query 49456 CGCTATCGTAACTGATCAAG-TCACCGGTGGACGCTTTAAAAACGTACGCCGCTTTAGCG 49514 | |||| || | | |||| || || || || | | | || ||||| | |||| ||| Sbjct 181941 CATTATCATAGGTTA-CAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGCG 181999 Query 49515 ACAGTGTCGTATGTGTACTTGTATTGCGCCGGCAACAAACTGTTTA-CAATTTGCCTGTA 49573 ||| ||||||| | ||| | | ||| | | | | || |||| | ||| || Sbjct 182000 ACATTGTCGTAATGGAACTCCCACTT-GCCTTGAGCGATTTCATTCGCAATCTCCCTATA 182058 Query 49574 ATCCACTACGCCGTCCTCCCAAGTGCCCACGACAGGACCACCGGCAACGCCTGTGAACGG 49633 || || || ||||| | |||||| || |||||| ||| || ||||||||| || Sbjct 182059 GTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGG 182118 Query 49634 GTTGTCATCTGTGTAATCGTCGACTGCGGTCCAACCGCGGCCGTACATTGCCACTCCGAT 49693 ||| ||| ||||||| | || | |||||||| || || ||||| || || || | Sbjct 182119 AATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTAC 182178 Query 49694 GACAATTTTTTCGCTAGCCACGTTCTGTTTGAGCAGCTCGCGAACAGCGGTGTCAGTGGT 49753 ||||| || | | ||| ||| |||| | || || ||||| || Sbjct 182179 TACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGT 182238 Query 49754 GTACAGTTCGCCGGCGTTCCACAGCGGCGCATACAAATTGGTTTGGTAACCTAAATCGAC 49813 ||| ||| || |||||| ||||| ||||| ||||| | || | | | | Sbjct 182239 GTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGTGTC 182298 Query 49814 ATTGGACCAAGCACCTTTAAAATCGTACGACATTAGAAAAATTTGATCTAAATATTGCTG 49873 ||| ||||| || || || || ||||| ||| | ||||| ||||| | ||| | || Sbjct 182299 ATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTG 182358 Query 49874 GGCGCTAGCATAGTCGACCAACTCGATTTTGTCATAGCCGGCGCCAATAGCTGAAGTCAA 49933 || | ||||||| || | | |||||| || | || |||| |||||| ||||| || Sbjct 182359 AGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAA 182418 Query 49934 AAGCAGTTTACGACCGGTCTGCTCTTGCACTTCGTCTAACATTTTGCGCAACTCTTTAAG 49993 ||| ||| ||| || | ||||| | ||| | || || ||||| | Sbjct 182419 TTCGTATTTCTTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCAT 182478 Query 49994 CAAAATCACGTACGTGGCACCGTCATTGTCAACATCTCCCAAAATC-GGGTTGGCGCCTT 50052 |||| | || || |||| || || | | | || | || ||||| || |||| Sbjct 182479 CAAACTTACATAACAATCACCATC-TTCTGGGC---TACCGAGGTCAGGGTTAGCACCTT 182534 Query 50053 TGCCGCCCGGAAACTCCCAGTCAATGTCGACGCCGTCGAAAAATTTCCAAACTTGTAAAA 50112 |||| || || |||||||| || || || || || ||||| |||||||| | | | || Sbjct 182535 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAA 182594 Query 50113 ATTCGCGAACCGACTCCACAAACACTTTTCTGATCGCGTCATCGTGCATGAAAAAGAATG 50172 | || || |||| |||||| | |||| | | | || | || ||||| | Sbjct 182595 ACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAG 182654 Query 50173 GATCCGACAGAGTCCAACCGCCGATCGAAGGCAAAATTTTAATGTGCGGATGCGCCTTTT 50232 |||| | || ||||| || || || || || | ||| || | | || | || | || Sbjct 182655 GATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 182714 Query 50233 TGACGGCCATTAACTGACCAAAATTGCCTTTATACGGTTCGTTCCACGCGGACACTCCTT 50292 | | | |||||| || ||||| |||||||| || || |||||||| | |||| ||||| Sbjct 182715 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCTT 182774 Query 50293 TTTGCGGCTTCTGTATGGCGGCCCAAGGGTCGTGTATGGACACTTTAAAATCTTCCCGTC 50352 |||| || || |||| || ||||| || ||||| || || ||||| || || || || | Sbjct 182775 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGC 182834 Query 50353 CCGCACACGATCGCTGCAACGCCTCGAAACTGCCGGTGATGGTTTTGAGGCTGTCGTTGA 50412 | ||| || ||||| | || | ||||||||| ||| ||| | || || |||| Sbjct 182835 CGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGA 182894 Query 50413 TACCGTCGCCGCCGCAAATGGGAATGAAACCGTACAACAGATGAGTTAAATTTGGCACAG 50472 | ||||| ||||||||||| || || || ||||| | || |||||| | ||| || | || Sbjct 182895 TGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAG 182954 Query 50473 GCACTTTGTCCGCTGGAAAGTTGCGACCGTATACTCCCCACTCAACAAAGTATGCCGCCA 50532 | | ||| | || || || | | || || ||||| || || ||||| || ||| Sbjct 182955 GTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCA 183014 Query 50533 CGACTTT 50539 | ||||| Sbjct 183015 CAACTTT 183021 >seq3345 Length=207354 Score = 215 bits (238), Expect = 4e-51 Identities = 1085/1704 (64%), Gaps = 66/1704 (4%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || || ||||| ||||| | || || || ||||| || || ||||| ||| Sbjct 113386 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 113327 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGCTGC-ACATT-GTTTGG--TAA 130519 ||||| | || ||||| ||| | ||||| || | || | |||| || Sbjct 113326 GTTTTTAAACCCATTTT----CCA--AGCGTGGAAATGAATCGACGTAAGTTTTCCATAG 113273 Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || |||| || || |||||| | ||||| ||| || |||||||| || || || Sbjct 113272 TTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCA 113213 Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638 || ||||| | | | ||| ||| | | |||||||| |||| ||||| | ||| || Sbjct 113212 GCTGCCATCTGTATGGATGTTTTCAGTGAA-ATCTCCCATACGGTTTTGTACAAATCTCT 113154 Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698 || | ||| || || |||| ||| | || |||||| |||||| || Sbjct 113153 TATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATT 113094 Query 130699 GCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758 |||| || ||| |||| || | | | ||| | | | ||||| || | Sbjct 113093 TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCAC 113034 Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 | |||| || |||| | ||| | ||| |||||| || || || |||||||| Sbjct 113033 TACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAA 112974 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 ||||| ||||||| | |||||||| |||| || || ||||| || | ||||| Sbjct 112973 AGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAG 112914 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 |||||| || | ||| || | | || ||| || | || |||| ||||| || Sbjct 112913 AGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTC 112854 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998 ||||| | |||| |||||||||| | || || || |||| || || ||||| Sbjct 112853 TGTAGGAGTT---TTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 112797 Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058 || | | ||| ||||| ||| | || |||||||| || || || Sbjct 112796 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACC 112737 Query 131059 GTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGG 131118 |||||||| ||||| ||||||| ||| | || | |||| | || ||||||| Sbjct 112736 ATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA 112677 Query 131119 AAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATG 131178 || | |||| || | ||| || ||||| | ||||| | |||| || | |||||||| Sbjct 112676 AATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATG 112617 Query 131179 TTTTAAATTACA--TTTACGCGAACATTCGGTG---GGATAAAGGTTAATGTCAATTATT 131233 | | | ||| | ||| || ||| | | ||||||| |||| ||||| | | Sbjct 112616 TCTCATATTTGAAGTTTTTGC-----TTCAGGGACAGGATAAAAATTAACATCAATAACT 112562 Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293 ||||||||||| | |||||| | ||||| ||| ||||| | |||| ||| | Sbjct 112561 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTA 112502 Query 131294 CCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353 | |||| ||||| || | ||| || || || || || |||||| | Sbjct 112501 TTATTTTC------AACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACT 112448 Query 131354 TCGTCAT---AATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTG 131410 || || | || | || || |||| || | ||| | ||| || | || || ||| Sbjct 112447 TCATCTTCTGAAGTG---TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 112391 Query 131411 CCCAAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGT 131469 || | ||||| |||||| || || | | ||| | ||||| |||| |||||| || || Sbjct 112390 CCAAGATTTTTTTGATTACTCTT-TCTGTTACAAGCATCCTTATACAACATGTATGGTGT 112332 Query 131470 GCCCGTTTCGACTTGAGTTTCAATAATGTA--TCGAAAGAGTTTTCGAGCAGACAATTGA 131527 || || || ||||| | ||| ||||| | || | | | | || |||| | ||| Sbjct 112331 ACCAGTCTCTACTTGGGCTTCTATAATTGACTTCCATA-ACTCTT-GAGCTCTGACTTG- 112275 Query 131528 TATTTGTATTGGCCGCGTTT-TTCGTAAT-TTTCGTACAACGT--TTCAAAGTTTTGGCC 131583 || ||| || ||| ||| | || ||| | | | || |||||| | | || Sbjct 112274 ---TTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCC 112218 Query 131584 AAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTG 131643 ||| | | | ||||| || |||||||| || ||| || | | || Sbjct 112217 AAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTT 112158 Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703 ||| |||| |||||||||| ||| || | |||||| || || ||||| ||||||||| | Sbjct 112157 TTCTACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCT 112098 Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 | ||||| ||||| | | || || |||| || || || || ||||| |||||||| Sbjct 112097 CATTTCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCA 112038 Query 131764 GGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACATG 131817 || || ||||| | || | ||| || |||| || || ||||||| |||| Sbjct 112037 AGGCTCTAAATAAATCGCAAATGCACCGGGACGTTTG---TTTCCACCTTGATCTACATA 111981 Query 131818 ACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGT 131877 | | | ||||| || || | |||||| ||| | | ||| || | | ||||| || Sbjct 111980 TCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGT 111921 Query 131878 GCTCTTAATGTAGCTGCCATTGGCTCTGAT--TTTGTGAACGTTGAGTCCAATACCTCCG 131935 || ||||| || | |||||||| |||| | || | || || || || Sbjct 111920 GCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGT--AAACCTATGCCACCA 111863 Query 131936 CCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCC 131995 | ||||||| |||| ||| |||| ||| ||| | | | |||||||| | ||| || Sbjct 111862 GCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCG 111803 Query 131996 GCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAAC 132055 | || | | | ||||| ||||| | ||| | | |||| | ||||| || Sbjct 111802 TCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAAT 111743 Query 132056 AATGTGGGGCTGGCGTGTGTAAAA 132079 | ||| ||||| || ||||||||| Sbjct 111742 AGTGTAGGGCTTGCATGTGTAAAA 111719 >seq2787 Length=76071 Score = 161 bits (178), Expect = 8e-35 Identities = 176/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || || || ||||| || || || || || ||||| |||||||||||||| Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | ||| | || || ||||| || || ||| |||||||||| |||||||| || || Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || ||||||| ||| | |||| | |||||||| || ||||||| Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 |||| || |||| ||| || ||||| || || |||||||| |||||| || || Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATACCTCCT 41096 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| ||| ||||| | ||||| |||||||| || |||||||| | Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| ||||| || || || | || ||||| |||||||| || || Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | |||||||||||| ||||| || | |||| | ||||| | |||| || || Sbjct 40525 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGC-TCCAC 40467 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||||| ||||| || || || || ||||| ||||||||| Sbjct 40466 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 40418 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || || | ||||||||| ||||||| ||||| || ||||||||||| || || | | Sbjct 39961 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 39902 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| | || | ||||| || ||||| || || |||| || | ||||||||| || || Sbjct 39901 AATG-TACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGG 39843 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || |||||| |||| |||| | |||||| | | || || Sbjct 39842 AATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTAC 39783 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||| || | ||| || || ||||| || |||||||| ||||| Sbjct 39782 CTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | |||||| || | || || ||||| || ||||||||||| | Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| || |||||||| ||| | || ||||| |||||||| || || Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | || || ||||| ||||| ||| | |||| | ||||||| |||| ||||| Sbjct 40981 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGC-TCAAC 40923 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | |||||| | ||| || || || ||||| ||||| |||||||| Sbjct 40922 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 40875 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089 || || | ||| || || || ||||| |||||||| || |||||||| || | || Sbjct 40180 AAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGA 40121 Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149 | ||||| | || || || || |||| ||||| ||||||||||| || | || ||| Sbjct 40120 CCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCT 40061 Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209 || || ||| || ||||| |||| | ||||| | ||||||||||||| ||| Sbjct 40060 TTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTA 40001 Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || || || ||||| ||||||||||||||| Sbjct 40000 ATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | ||||| |||||||||||||| ||||| | |||| || Sbjct 39721 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCG 39662 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || || || ||| |||| | ||| |||||||| || || | || || || Sbjct 39661 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 39602 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || ||| ||| | |||| | ||| || | | ||||||||| | ||| || Sbjct 39601 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 39542 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| ||||| || |||||||||||||| ||||| Sbjct 39541 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| ||||| || ||||| |||||||| || || ||||| || |||| | || || Sbjct 41540 TACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTC 41481 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||||||||| || | |||||||||||||| || || || | ||||| ||||| Sbjct 41480 TAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTG 41421 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATT 27216 |||||| || | |||| | |||||| | |||| || || || | ||| || | | Sbjct 41420 GATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGC-TCCACCTCCAAAGTGATGGTCT 41362 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || || ||||| || |||||||| |||||| || || Sbjct 41361 TCCCAGTAAGAGTCTTAACAAAGATCTGCATACCTCCT 41324 >seq3424 Length=494560 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || ||||| || ||||| || || || ||||| ||||| || |||| | Sbjct 290193 CGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCA 290134 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || || || |||||| |||| || | |||||||| || || | || || || Sbjct 290133 TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 290074 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | |||||| ||||| | || || ||||| | || ||| Sbjct 290073 TCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATA 290014 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| |||| ||||||||||| |||||||| Sbjct 290013 GTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | || ||||| ||||| || || || || || || |||||||||||||| | | Sbjct 289521 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 289462 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| ||| | ||||| ||||| || || || |||| || | || ||||| || || Sbjct 289461 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289403 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||||||||| || || || | |||| | || || | ||||| || Sbjct 289402 AATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 289343 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | ||| |||| ||||| ||||| || || ||||| |||||||| Sbjct 289342 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | || ||||| ||||| ||| || ||||| || || |||||||||||||| | | Sbjct 289749 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 289690 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| ||| | ||||| ||||| || || || |||| || | || ||||| || || Sbjct 289689 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289631 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| || || || | |||| | || || | ||||| || Sbjct 289630 AATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 289571 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | || |||| ||||| ||||| || || ||||| |||||||| Sbjct 289570 TTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289523 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTT 27096 ||| |||||||| ||||| ||||| |||||||||||||| | | || | || | || | Sbjct 289960 TACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTG-TACGTCCATCCT 289902 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | || || || || || |||| || | ||||| || || || | || || ||||| Sbjct 289901 CAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTT 289842 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 || ||| || | |||| | ||||| | || |||||||| || || |||| | Sbjct 289841 GAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCT 289782 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| || |||||||| |||||||| Sbjct 289781 TGCCAGTCAGTGTCTTCACAAATATTTGCAT 289751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || || ||||| || ||||||||||| || || || | || | Sbjct 289281 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 289222 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || |||| || | |||||| || || || | || ||||| Sbjct 289221 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 289162 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || || || | |||||| || || | || || ||||| | || ||| Sbjct 289161 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACTTCCAATGTGATA 289102 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| ||||| || || ||||| |||||||| Sbjct 289101 GTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | || ||| | ||| | || || ||||| ||||| ||||| ||||| || | | Sbjct 289065 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 289006 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| ||| | ||||| ||||| || || || |||| || | || ||||| || || Sbjct 289005 AGTGT-GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 288947 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| || || ||| | |||| | || || | | ||||| Sbjct 288946 AATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 288887 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | ||| |||| ||||| ||||| || || || || |||||||| Sbjct 288886 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424912084171608