Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 149 8e-31
>seq3345
Length=207354
Score = 149 bits (164), Expect = 8e-31
Identities = 457/701 (65%), Gaps = 22/701 (3%)
Strand=Plus/Minus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
|||||| |||| || |||| ||| | |||||||| ||||| | || || | |||||
Sbjct 113009 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTG 112950
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817
||| || ||||| || |||||||| || ||||| ||| || || | ||| | | ||
Sbjct 112949 TGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGAGAATTGCGCAAACCATGTT--TT 112892
Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872
| || ||| ||||| || ||||||| | || | || | || |||||
Sbjct 112891 GCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 112835
Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932
|| ||| |||| || | |||||| || ||| || | | | || || | ||||
Sbjct 112834 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 112775
Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992
| |||||| |||||||| || || || | | | | ||| || |||||||| ||
Sbjct 112774 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 112715
Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACA 111052
| ||| | | |||| || || | | | ||| | ||| ||
Sbjct 112714 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAAATTCTCATCAACACAAACGCA 112655
Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 111112
|| || | || |||||||| | |||||||||||| |||| |||||| || || ||
Sbjct 112654 TCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCT 112595
Query 111113 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 111169
||| || ||||||||||| ||||| ||| ||||| ||||| || ||||||
Sbjct 112594 ---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATC 112538
Query 111170 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229
||||||||||| | | ||||| | ||| ||| | | | | |||| ||| || |
Sbjct 112537 TTTGTGATTTCTTTTAATTTTTTAAAATTAAA---TCTATTATTTTCA---ACAAACATG 112484
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
||| || || || || | ||||| || ||| ||||| | ||||| | | |
Sbjct 112483 TTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACA 112424
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
| || || || | ||| || ||||| || || | ||| ||||| |||||||| ||
Sbjct 112423 ACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTG 112364
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390
|| || |||||||| || | |||||| || || || |||||
Sbjct 112363 TTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 112323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627998172626400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |