Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_028103.1 Length=32939 Score E Sequences producing significant alignments: (Bits) Value seq3063 345 9e-91 >seq3063 Length=7092 Score = 345 bits (382), Expect = 9e-91 Identities = 328/419 (78%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 10909 GTGACGGCTTACGAACAAACCGTGAAAGAAGAAATGAACTTTCAAAAAAGCTTTAATAAC 10968 || || || ||||| || || ||||| | || || |||||||||||||||||||| ||| Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732 Query 10969 CACGTGCGAACTTTGATAGCAAGGGAGGAGGTGGCAATAGGACTAATGCATCTTTGGGAT 11028 |||||||| || | | || | ||||||||||| |||||||| |||||||| ||||| Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792 Query 11029 TTTTTGGAGGCGTATGTTCAGAATCCCACCAGCAAGCCGCTGACCGCTCAACTTTTCTTA 11088 ||| | ||| | || || || | ||||||||||| | || || || ||| | Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852 Query 11089 ATTGTGCAACACAGCAGAGACAACGAGACATTTAGAGATGCGCTTTTAAACATAGCAGAA 11148 || ||||| |||||||| ||||||||| |||| || |||||||| ||||||||| ||| Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912 Query 11149 CCAGAAGGACGGTGGTTGCTAGACTTGATTAACATTCTTCAGAGCATAGTGGTACAGGAA 11208 || || || || ||| |||| || ||||| |||||||| |||||||||||||| ||||| Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972 Query 11209 CGTAGCCTGAGTTTGGCCGACAAGGTTGCGGCCATTAACTACTCCATGTTAAGTTTGGGA 11268 || ||| |||| |||| |||||||| || ||||||||||| |||||| | ||| |||| Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032 Query 11269 AAGTTTTACGCGCGTAAAATTTACAAGACCCCTTACGTGCCCATTGACAAAGAAGTAAA 11327 ||||||||||| || || || ||| | ||||||||||| ||||| ||||| || ||||| Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105277812724458