Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_028105.1 Length=35159 Score E Sequences producing significant alignments: (Bits) Value seq3063 389 9e-104 >seq3063 Length=7092 Score = 389 bits (430), Expect = 9e-104 Identities = 338/420 (80%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 10951 GGTGACGGCCTACGAGCAGACGGTGAACGAGGAGCGCAACTTTCAAAAGAGCTTCAACAA 11010 ||| || || |||||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 11011 CCACGTGCGCACCCTCGTGGCCCGGGAGGAGGTGGCGATCGGGCTGATGCACCTGTGGGA 11070 |||||||||||| || ||||| || ||||||||||| || || |||||||| |||||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 11071 CTTTGTGGAGGCGTTCGTGCACAACCCGAGCAGCAAGCCCCTGACGGCGCAGCTGTTTCT 11130 |||||| ||| | | ||| ||||| | |||||||| || | |||||||||||| || Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 11131 AATCGTGCAACACAGCCGCGATAACGAGATCTTCCGCGACGCGCTGTTAAACATTGCGGA 11190 || ||||| |||||| | || |||||| ||| | || |||||| ||||||| | || Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911 Query 11191 GCCCGAGGGCCGCTGGTTGCTGGATCTTATTAACATCTTGCAGAGCATCGTAGTGCAGGA 11250 |||||||||||||||| |||| ||| | || ||||| |||||||||| || |||||||| Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971 Query 11251 ACGGGCGCTGAGTCTGGCCGAGAAGGTGGCGGCCATCAACTACTCGATGCTGAGCCTGGG 11310 || |||| ||||| || |||||||| ||||| ||||| || ||||| || ||||| Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031 Query 11311 CAAGTTTTACGCTCGCAAGATTTACAAGAGCCCCTTCGTGCCCATTGACAAGGAGGTGAA 11370 |||||||||||| |||||||| ||| | | ||| | ||| ||||| ||||||||||| || Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091 Score = 116 bits (128), Expect = 8e-22 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 15121 AAGATGTACGGAGGCGCCAAGCGACGCTCGGCGGATCACCCCGTGCGCGTGCGCGGACAC 15180 ||||||| || || || ||| ||||| | | ||||| |||||||||||||| ||| Sbjct 9 AAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCAC 68 Query 15181 TTCCGGGCGCCCTGGGGGGCCCACAAGCGCGGACGCACCGGTCGCACCACCGTCGATGAA 15240 | ||| ||||||||||| || ||||| ||||| ||||| || ||||||||||||||||| Sbjct 69 TACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGATGAC 128 Query 15241 GTTATCGACAGCGTGGTGGCCGACGCG 15267 | || ||| ||||||| || ||| Sbjct 129 GCCATTGACGCGGTGGTGGAGGAGGCG 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112381449217218