Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_028105.1
Length=35159
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 389 9e-104
>seq3063
Length=7092
Score = 389 bits (430), Expect = 9e-104
Identities = 338/420 (80%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 10951 GGTGACGGCCTACGAGCAGACGGTGAACGAGGAGCGCAACTTTCAAAAGAGCTTCAACAA 11010
||| || || |||||||||||||||||| ||||| ||||||||||| ||||| |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11011 CCACGTGCGCACCCTCGTGGCCCGGGAGGAGGTGGCGATCGGGCTGATGCACCTGTGGGA 11070
|||||||||||| || ||||| || ||||||||||| || || |||||||| ||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11071 CTTTGTGGAGGCGTTCGTGCACAACCCGAGCAGCAAGCCCCTGACGGCGCAGCTGTTTCT 11130
|||||| ||| | | ||| ||||| | |||||||| || | |||||||||||| ||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11131 AATCGTGCAACACAGCCGCGATAACGAGATCTTCCGCGACGCGCTGTTAAACATTGCGGA 11190
|| ||||| |||||| | || |||||| ||| | || |||||| ||||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11191 GCCCGAGGGCCGCTGGTTGCTGGATCTTATTAACATCTTGCAGAGCATCGTAGTGCAGGA 11250
|||||||||||||||| |||| ||| | || ||||| |||||||||| || ||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11251 ACGGGCGCTGAGTCTGGCCGAGAAGGTGGCGGCCATCAACTACTCGATGCTGAGCCTGGG 11310
|| |||| ||||| || |||||||| ||||| ||||| || ||||| || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11311 CAAGTTTTACGCTCGCAAGATTTACAAGAGCCCCTTCGTGCCCATTGACAAGGAGGTGAA 11370
|||||||||||| |||||||| ||| | | ||| | ||| ||||| ||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Score = 116 bits (128), Expect = 8e-22
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 15121 AAGATGTACGGAGGCGCCAAGCGACGCTCGGCGGATCACCCCGTGCGCGTGCGCGGACAC 15180
||||||| || || || ||| ||||| | | ||||| |||||||||||||| |||
Sbjct 9 AAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCAC 68
Query 15181 TTCCGGGCGCCCTGGGGGGCCCACAAGCGCGGACGCACCGGTCGCACCACCGTCGATGAA 15240
| ||| ||||||||||| || ||||| ||||| ||||| || |||||||||||||||||
Sbjct 69 TACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGATGAC 128
Query 15241 GTTATCGACAGCGTGGTGGCCGACGCG 15267
| || ||| ||||||| || |||
Sbjct 129 GCCATTGACGCGGTGGTGGAGGAGGCG 155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112381449217218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |