Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_028107.1
Length=34064
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 334 2e-87
>seq3063
Length=7092
Score = 334 bits (370), Expect = 2e-87
Identities = 326/420 (78%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 10592 GTCACCGCATACGAGCAGACGGTGAACGAGGAGCTTAACTTCCAAAAAAGCTTTAACAAC 10651
|| ||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10652 CACGTTAGGACCCTGATAGCGCGAGAGGAGGTGGCCACGGGGCTGATGCATCTGTGGGAT 10711
||||| | || || | ||||| ||||||||||| | || |||||||||||||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10712 TTCATAGAGGCCTACGTACAGAATCCTACTAGCAAGCCGTTAACGGCACAGCTGTTTTTG 10771
|| || || | || || || | |||||||||| | | ||| |||||||| |
Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852
Query 10772 ATAGTGCAGCACAGTCGCGACAACGAAACCTTTCGCGAGGCCATGTTAAACATCGCGGAG 10831
|||||||||||||| | |||||||| | || | || || || ||||||| | |||
Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912
Query 10832 CCCGAGGGTCGGTGGTTGTTGGATTTGGTTAACATCTTGCAAAGTATAGTAGTTCAGGAG 10891
|||||||| || ||| || | |||||| | ||||| |||| || ||||| || ||||||
Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972
Query 10892 AGGAGCTTGAGCTTGGCCGACAAGGTGGCGGCTATCAATTACTCGATGCAGAGTCTGGGT 10951
| ||||||||| |||| ||||||||||| || || || || || |||| ||||||||
Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032
Query 10952 AAATTCTACGCCCGCAAAATTTACAAGAGTCCATACGTGCCCATTGACAAAGAGGTAAAG 11011
|| || ||||||||||| || ||| | | || ||||| ||||| ||||| |||||||||
Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 89.7 bits (98), Expect = 1e-13
Identities = 161/234 (69%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 15442 CGCACCGCGGCGCAGGGTGCAGTGGAAAGGGCGGCGTGTTCAGCGCGTGCTGAGACCGGG 15501
||| || |||| |||| ||||||||||| || || || || || || |||| ||
Sbjct 791 CGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGG 850
Query 15502 CACCACGGTGGTGTTTACCCCAGGACAGCGCTCGGCTGCGCGGGGTTTCAAGCGGCAATA 15561
|||||| || || ||||| || || ||||||| | || | |||||| ||
Sbjct 851 CACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACC---CGCACCTACAAGCGCGTGTA 907
Query 15562 CGATGAGGTGTACGGCGACGAGGACATTTTGGAGCAAGCCGCGCAACAAATCGGAGAGTT 15621
|||||||||||||||||||||||| | | ||||| ||| | | |||| |||||
Sbjct 908 TGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTT 967
Query 15622 CGCTTACGGGAAGCGCTCTCGTCGGGAAAACGTCGCTCTGGCGCTGGACGAGGG 15675
|| ||||| ||||| | | ||| | | || || |||||||||||||
Sbjct 968 TGCCTACGGAAAGCG---GCATAAGGACATGTTGGCGTTGCCGCTGGACGAGGG 1018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108877628514708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |