Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_028107.1 Length=34064 Score E Sequences producing significant alignments: (Bits) Value seq3063 334 2e-87 >seq3063 Length=7092 Score = 334 bits (370), Expect = 2e-87 Identities = 326/420 (78%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 10592 GTCACCGCATACGAGCAGACGGTGAACGAGGAGCTTAACTTCCAAAAAAGCTTTAACAAC 10651 || ||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732 Query 10652 CACGTTAGGACCCTGATAGCGCGAGAGGAGGTGGCCACGGGGCTGATGCATCTGTGGGAT 10711 ||||| | || || | ||||| ||||||||||| | || ||||||||||||||||| Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792 Query 10712 TTCATAGAGGCCTACGTACAGAATCCTACTAGCAAGCCGTTAACGGCACAGCTGTTTTTG 10771 || || || | || || || | |||||||||| | | ||| |||||||| | Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852 Query 10772 ATAGTGCAGCACAGTCGCGACAACGAAACCTTTCGCGAGGCCATGTTAAACATCGCGGAG 10831 |||||||||||||| | |||||||| | || | || || || ||||||| | ||| Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912 Query 10832 CCCGAGGGTCGGTGGTTGTTGGATTTGGTTAACATCTTGCAAAGTATAGTAGTTCAGGAG 10891 |||||||| || ||| || | |||||| | ||||| |||| || ||||| || |||||| Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972 Query 10892 AGGAGCTTGAGCTTGGCCGACAAGGTGGCGGCTATCAATTACTCGATGCAGAGTCTGGGT 10951 | ||||||||| |||| ||||||||||| || || || || || |||| |||||||| Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032 Query 10952 AAATTCTACGCCCGCAAAATTTACAAGAGTCCATACGTGCCCATTGACAAAGAGGTAAAG 11011 || || ||||||||||| || ||| | | || ||||| ||||| ||||| ||||||||| Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092 Score = 89.7 bits (98), Expect = 1e-13 Identities = 161/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 15442 CGCACCGCGGCGCAGGGTGCAGTGGAAAGGGCGGCGTGTTCAGCGCGTGCTGAGACCGGG 15501 ||| || |||| |||| ||||||||||| || || || || || || |||| || Sbjct 791 CGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGG 850 Query 15502 CACCACGGTGGTGTTTACCCCAGGACAGCGCTCGGCTGCGCGGGGTTTCAAGCGGCAATA 15561 |||||| || || ||||| || || ||||||| | || | |||||| || Sbjct 851 CACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACC---CGCACCTACAAGCGCGTGTA 907 Query 15562 CGATGAGGTGTACGGCGACGAGGACATTTTGGAGCAAGCCGCGCAACAAATCGGAGAGTT 15621 |||||||||||||||||||||||| | | ||||| ||| | | |||| ||||| Sbjct 908 TGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTT 967 Query 15622 CGCTTACGGGAAGCGCTCTCGTCGGGAAAACGTCGCTCTGGCGCTGGACGAGGG 15675 || ||||| ||||| | | ||| | | || || ||||||||||||| Sbjct 968 TGCCTACGGAAAGCG---GCATAAGGACATGTTGGCGTTGCCGCTGGACGAGGG 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108877628514708