Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_028113.1
Length=35685
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 365 1e-96
>seq3063
Length=7092
Score = 365 bits (404), Expect = 1e-96
Identities = 304/372 (82%), Gaps = 0/372 (0%)
Strand=Plus/Plus
Query 11061 AGCTTTAACAACCACGTGCGCACGCTGGTGGCGCGCGAGGAGGTGGCCATCGGGCTGATG 11120
|||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||
Sbjct 6721 AGCTTTAACAACCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATG 6780
Query 11121 CACCTGTGGGACTTTGTGGAGGCGTTCGTGCACAACCCCGGCAGCAAGGCGCTGACGGCG 11180
|| |||||||||||||| ||| | | ||| ||||| |||||| |||| | ||||
Sbjct 6781 CATCTGTGGGACTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCG 6840
Query 11181 CAGCTGTTTCTAATCGTGCAGCACAGTCGCGACAACGAGCTGTTTCGCGACGCCCTGCTA 11240
|||||||| || || ||||||||||| | ||||||||| || | || || ||||||
Sbjct 6841 CAGCTGTTCCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTA 6900
Query 11241 AACATCGCCGAGCCCGAGGGCCGGTGGCTGCTGGACCTGATTAACATCTTGCAGAGCATT 11300
||||| | |||||||||||||| |||||||| || |||| ||||| ||||||||||
Sbjct 6901 AACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATA 6960
Query 11301 GTGGTGCAAGAGCGCTCGCTCAGCCTGGCCGACAAGGTGGCGGCCATCAACTATTCGATG 11360
|||||||| |||||| | |||||||| ||||||||||| ||||| |||||||| |||
Sbjct 6961 GTGGTGCAGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATG 7020
Query 11361 CTGAGCCTGGGCAAGTTTTACGCGCGCAAAATCTACCGCAGCCCGTACGTGCCCATCGAT 11420
|| || ||||||||||||||||| ||||| || |||| | ||| ||||| ||||| ||
Sbjct 7021 CTCAGTCTGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGAC 7080
Query 11421 AAGGAGGTGAAG 11432
|||||||| |||
Sbjct 7081 AAGGAGGTAAAG 7092
Score = 125 bits (138), Expect = 2e-24
Identities = 125/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 15271 CAAGATGTACGGGGGTGCCAAGCGCCGCTCCAGCGAGCACCCGGTGCGCGTCAGAGGCCA 15330
|||||||| || || || ||| |||||| | | ||||| |||||||| | || ||
Sbjct 8 CAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCA 67
Query 15331 CTTCCGCGCGCCCTGGGGGGCCCACAAGCGCGGCCGCACGGGGCGCACCACGGTCGACGA 15390
|| ||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| ||
Sbjct 68 CTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGATGA 127
Query 15391 GGTCATCGACAGCGTAGTGGCCGATGCCGCCAACTACACGCC 15432
| ||| ||| || |||| || || ||||||||||||
Sbjct 128 CGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCC 169
Score = 107 bits (118), Expect = 4e-19
Identities = 160/225 (71%), Gaps = 9/225 (4%)
Strand=Plus/Plus
Query 15980 CGACGCGGTAGAGTTTGTGCGCGCCACGGCCCCCAGGCGGCGGGTGCAGTGGAAGGGTCG 16039
||||| ||| || | ||| ||| || || |||||||||||||| |||||||| |||||
Sbjct 764 CGACGAGGTGGAACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCG 823
Query 16040 GCGCGTGCGCCGCGTGTTGCGCCCAGGCACGGCGGTGGTGTTTTCGCCCGGCGAGAGGTC 16099
||||| | || || ||||| || ||||| | || || ||| ||||||| ||| | ||
Sbjct 824 ACGCGTAAGACGTGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTC 883
Query 16100 GGCGCTGCGGGCGCTGAAGCGTGACTACGACGAAGTGTACGCGGACGAAGACGTGCTGGA 16159
| || | ||||| | || || || ||||||| ||||| ||| |||| ||
Sbjct 884 CAC---CCGCACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGA 940
Query 16160 GCAGGC---GGAGCGACAAGAGGGAGAGTTTGCTTACGGCAAGCG 16201
|||||| ||||| | || |||||||| ||||| |||||
Sbjct 941 GCAGGCCAACGAGCGCC---TCGGGGAGTTTGCCTACGGAAAGCG 982
Score = 87.8 bits (96), Expect = 4e-13
Identities = 184/269 (68%), Gaps = 23/269 (9%)
Strand=Plus/Plus
Query 15641 CGCCGGGCGGCCCGTCGC-GCGGCCGCTGCCATCACTCGCATGTCCCGAGGGCGCCGCGG 15699
|| || |||||| | ||| || ||||| ||||| | | ||| | | || ||| | ||
Sbjct 417 CGACGAGCGGCC-GCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGG 475
Query 15700 TAACGTCTACTGGGTGCGCGACTCCGTGACGGGGTTGCGTGTGCCCGTGCGCTTCCGCCC 15759
||||| ||||||||||||||||| | || |||| |||||||||||| ||||||
Sbjct 476 CAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCC 535
Query 15760 TCCTCG----------GCAGTAAAAAACCACACTCAG-CT-GTGC-GTCTTGTGTGTTCA 15806
|| || ||| ||||||| ||| || || || | || | ||| | ||
Sbjct 536 CCCGCGCAACTAGATTGCAAGAAAAAAC--TACTTAGACTCGTACTGTTGTATGTATCCA 593
Query 15807 GCGGCGGCGTCG------GACGGCATGAGCAAGCGCAAGTTTAAAGAAGAATTGCTGCAG 15860
||||||||| || || | ||| ||||||||| | |||||||| |||| |||
Sbjct 594 GCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAG 653
Query 15861 GCCGTAGCGCCCGAGATTTACGGGCCGCC 15889
| | | ||||| ||||| || || || ||
Sbjct 654 GTCATCGCGCCGGAGATCTATGGCCCCCC 682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114064563088926
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