Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3463 223 3e-53 seq2787 163 2e-35 seq3424 129 5e-25 seq1305 93.3 4e-14 seq994 87.8 2e-12 >seq3463 Length=282612 Score = 223 bits (246), Expect = 3e-53 Identities = 782/1206 (65%), Gaps = 24/1206 (2%) Strand=Plus/Plus Query 53367 ACCCTTGTGTATCGCATTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAA 53426 |||| ||| || ||||||| || || ||||| || ||||| | |||||| ||||| | Sbjct 181828 ACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAG 181887 Query 53427 TCCACCGAGATCGTTTTCAATCACATACTGGCCCTTGTCTAGCACGGAATCGATGC--TG 53484 ||||| || | ||| | | ||||| | ||||| || | || || || | || | Sbjct 181888 ACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGA-TCTA-GCATTA 181945 Query 53485 TCGTAACTGATTAAATCGCCAGAGTTTTTAT----TGAATACAAACGCTGCTTTGGCTGT 53540 || || | | | ||| |||| || || |||| || | | |||| ||| Sbjct 181946 TCATAGGTTACAAGATCTCCAG----TTGATGGTCTGAAGACGTAAGGGGCTTGGGCGAC 182001 Query 53541 AGTGTCGTAAGTGTAATCGTA-TTGA--TGGCCAATTTT-TTCGTCAATTTTTCGGTAAT 53596 | |||||||| | | || | ||| || | |||| |||| |||| | | || | Sbjct 182002 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCGATTTCATTCG-CAATCTCCCTATAGT 182060 Query 53597 CAACGACTCCGTCTTCCCATGTGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGAT 53656 |||| |||||||||| ||| || ||| | ||||| ||||| || || ||||| ||| Sbjct 182061 CAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAA 182120 Query 53657 TGTCATCGCGGTAGCCGCTCACTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGAA 53716 ||| || ||| | || ||||||||||| || || ||||| || || || | | Sbjct 182121 TGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTACTA 182180 Query 53717 CAATTTTTTCCTGTTGAACTTTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTGT 53776 |||| || | | | ||| || | ||||| || | | || | |||| Sbjct 182181 CAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGTGT 182240 Query 53777 AATGCTCGCTGGGAGACCAAACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTGT 53836 || || ||||| ||| | |||||||| | | |||||||||||| | | | | Sbjct 182241 AAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGTGTCAT 182300 Query 53837 TTGACCAAGCGCCTTTAAAATCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGGG 53896 ||||||| || || || || || || ||| || ||||| |||| || | ||| | Sbjct 182301 TTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAG 182360 Query 53897 CGTCGCGATAGTTGACGACCGCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAACT 53956 | | || ||||| || || |||||||| || || || || || ||| || | Sbjct 182361 CCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATT 182420 Query 53957 CGAACTTTCGT-CCAGTTTCCAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAAC 54015 || | |||| | ||| | | | | | || | ||| | || || ||||| | | Sbjct 182421 CGTA-TTTCTTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCATC 182479 Query 54016 AACACCACATACGTTAAACTATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTTT 54075 || ||||| || ||||| | | | || | | || || ||||| || Sbjct 182480 AAACTTACATAACAATCACCATCTTCTGGGCTACCG---AGGTCAGGGTTAGCACCTTTG 182536 Query 54076 CCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAAT 54135 || ||||| ||||||||||||| || |||||||| || |||||||| || | || || Sbjct 182537 CCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAAAC 182596 Query 54136 TCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATCGTGGAAATGGTAAAACGGA 54195 || || || | |||||| | | | || || || ||| | | || ||| Sbjct 182597 TCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGA 182656 Query 54196 TCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTTC 54255 || | | |||||| || || || || || | | || | | || |||| ||| Sbjct 182657 TCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTT 182716 Query 54256 ACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTTT 54315 | | ||| | || ||||| |||||||| || || |||||||| | || | |||||| Sbjct 182717 AGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCTTTT 182776 Query 54316 TGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCCA 54375 || |||||||| | || ||||| ||||| ||||| | ||||| || ||| ||||| Sbjct 182777 TGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCG 182836 Query 54376 GCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTATT 54435 || || | ||||| |||| |||||||| || ||||||||| ||||| || Sbjct 182837 CTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGATG 182896 Query 54436 CCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGGC 54495 ||||| |||||||||||||| | ||| ||||| | | ||| || | |||||| | || Sbjct 182897 CCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGT 182956 Query 54496 ACTTTGTCCATTGGAAAATTTCGTCCG-TACACTCCCCATTCTACAAAATAGGCGGCCAC 54554 | |||| || |||||| | | || || ||||||||||| || ||||| |||| Sbjct 182957 ATACGATCCA-CGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCAC 183015 Query 54555 AACTTT 54560 |||||| Sbjct 183016 AACTTT 183021 >seq2787 Length=76071 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | ||||| || ||||||||||| || Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||||||||||| || ||| | || || |||||| Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | ||| | || ||||| |||| ||||| || Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTAT 40420 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | |||||| | ||||| ||||| ||| Sbjct 39507 ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 39566 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||||| |||||||| || || |||||| Sbjct 39567 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 39626 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || |||||||||||| | || |||| || || || Sbjct 39627 CAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTATAAT 39686 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || ||||| |||||| | || ||||| || Sbjct 39687 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAAT 39736 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || || | |||||| | ||||| ||| | || Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| ||||||||||||||||| || || |||||| Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || ||||| ||||| ||||| || || | || || |||||| Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || || || || || | ||||| | ||||| || Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTAT 40192 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| |||| || ||| | ||||| || ||||| ||||| || Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| ||||| || || || || ||||| || || || ||| Sbjct 40707 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 40766 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || || ||||||||||| || || | || |||||||| Sbjct 40767 CAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 40826 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || || || | ||| | || ||||| || Sbjct 40827 ATTCAGAAAGAGTCAACCCTGCACTTAGTGCTTCGTCTCCGTGGTGGAAT 40876 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || ||||| || || |||| || | ||||| ||||| || Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || ||||||||||| || || || || |||||| Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || |||| || | || |||| || ||||| Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAAT 41282 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || || || || || ||||| || || || || Sbjct 41283 ATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGGTAT 41332 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || || | || ||| | || || || |||||| Sbjct 39735 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCC 39794 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || ||||||||||| || || || || |||||| Sbjct 39795 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 39854 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || |||||| | ||||| | || | || ||||| || Sbjct 39855 CAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAAT 39914 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 ||||||||||| || ||| ||||||| || ||||| Sbjct 39915 ATTCAAAAGGAATCTACCCTACATTTAGTATTGCG 39949 >seq3424 Length=494560 Score = 129 bits (142), Expect = 5e-25 Identities = 178/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||||||||| || ||||| ||||| |||| || | |||||||| | || Sbjct 289067 ATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTCT 289126 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || |||||||||||||||||||||||| || || || ||| Sbjct 289127 GATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 289186 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| ||||||| | || | || ||||| || Sbjct 289187 CAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAAT 289246 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||||||||| || || || || ||||| |||| | ||||||| || ||| | | Sbjct 289247 ATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGGAAT-GCAA--ATT 289303 Query 27228 TTTGTAA 27234 ||||||| Sbjct 289304 TTTGTAA 289310 Score = 129 bits (142), Expect = 5e-25 Identities = 178/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| ||||| ||||||| | |||||||| | || Sbjct 289979 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTCT 290038 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||||||||| |||||||| || || |||||| Sbjct 290039 GACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 290098 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||| || ||| ||||||| | || | || || || || Sbjct 290099 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAAT 290158 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 || || |||||||| || || ||||| ||||||||| | | ||||| || ||| | | Sbjct 290159 ATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGGAAT-GCAA--ATT 290215 Query 27228 TTTGTAA 27234 ||||||| Sbjct 290216 TTTGTAA 290222 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||||||| | || || || | || || | ||||||||| | || Sbjct 288610 CATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTC 288669 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || ||| ||||||||||| |||||||| || || ||||| Sbjct 288670 TGATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCA 288729 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | |||| | |||||| || ||||||||||| | || | || || || || Sbjct 288730 ACAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTCTCAGACTATAA 288789 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || || || || ||||| ||| | ||||||| || Sbjct 288790 TATCCAGAAGGAATCTACTTTGCACTTAGTTTTACGTCTAAGGGGTGGAAT 288840 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||||||||| || ||||| |||||| |||| || | ||||||||| | || Sbjct 289523 ATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTCT 289582 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||| || ||||| ||||| || || ||||| Sbjct 289583 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAG 289642 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | ||||| | || | || || ||||| Sbjct 289643 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAAT 289702 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || || ||| |||| |||| || | ||||| || Sbjct 289703 ATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGGAAT 289752 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || ||||| |||||| |||| || || ||||| || || || Sbjct 289751 ATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTCT 289810 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||||||||| || |||||||| || || || ||| Sbjct 289811 GACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCAA 289870 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || ||| | || || | || | || || ||||| Sbjct 289871 CAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACAAT 289930 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || |||||||| || | ||| || | ||||| || Sbjct 289931 ATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGGGAT 289980 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/247 (68%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||| || ||||| |||||| |||| ||| | ||||| || || || Sbjct 288839 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCT 288898 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||| || ||||| || || || || ||||| Sbjct 288899 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 288958 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | ||||| | || | || ||||||||| Sbjct 288959 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGATTACAAC 289018 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||| || || || || || || | || | || || | ||||| || |||| | Sbjct 289019 ATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGAAT-GCAAATA-- 289075 Query 27228 TTTGTAA 27234 ||||||| Sbjct 289076 TTTGTAA 289082 >seq1305 Length=286731 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || | ||||| || || ||||| | ||| Sbjct 24984 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCC 24925 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| ||||| || ||||| || ||||| || || Sbjct 24924 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 24865 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | ||||| | || | || || |||||| Sbjct 24864 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAAC 24805 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||||||||| || || || ||| Sbjct 24804 ATTCAAAAGGAATCCACATTGCAT 24781 >seq994 Length=230138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 122173 TTGAAAAATTGATCTCCCATCATTGGCACACCCACTAGCGGTACAAGTGCTTCGATAGCT 122232 ||||| |||||||||| | |||||| || || | ||| |||||| ||| || ||| Sbjct 76079 TTGAACCATTGATCTCCTAACATTGGTACTCCAATTAGAGGTACACCCGCTGTTATTGCT 76020 Query 122233 TCATCGGTAGACTGTACACCACCTTGAGTGACAAACGCTTTCACATTGGGATG 122285 ||||| || || |||| ||| ||||| || | ||| ||||||||||| ||||| Sbjct 76019 TCATCTGTCGATTGTAGACCGCCTTGTGTTATAAATGCTTTCACATTAGGATG 75967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434894974207680