Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_029899.1 Length=37556 Score E Sequences producing significant alignments: (Bits) Value seq3063 214 4e-51 >seq3063 Length=7092 Score = 214 bits (236), Expect = 4e-51 Identities = 300/419 (72%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 10712 ACGGCCTACGAGCAGACGGCGCGCGAGGAAGCCAACTTCCAAAAGACCTTCAACAATAAC 10771 || || ||||||||||||| | | |||| ||||| ||||| | ||| ||||| || Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 10772 GTGCGCACGCTGGTGGCGCGCGAGGAGGTGACCATCGGTCTGATGCACCTGTGGGACTTT 10831 ||||||||||| |||||||||||||||||| | || || |||||||| |||||||||||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 10832 ACGGAGGCGTACGTGAGC--AACCCGAGCAGCAAGACGCTGACGGCGCAGCTGTTCCTGA 10889 | | ||| | |||| ||||| | |||||| |||| | ||||||||||||||| | Sbjct 6796 --GTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 6853 Query 10890 TCGCCCAGCACTCGCGCGACGAGGGGGTGTTCAAGGAGAGCCTGCTGACGTTGGCGGAGC 10949 | | |||||| | ||| | | || |||| ||| ||||| | | | |||| Sbjct 6854 TAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 6913 Query 10950 CCGAGAGTCAGTGGCTGGTGGACCTGATTAACATCCTGCAGTCCATCATCGTGCAAGAGC 11009 ||||| | | |||||| | || |||| ||||| |||||| ||| | ||||| |||| Sbjct 6914 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 6973 Query 11010 GGGGGATGCGGGTGCCCGAGAAGGTGGCGGCCATCAACTACAGCCTGATCAGCCTGGCGA 11069 | | || | || | || |||||||| ||||| ||||| | || |||| |||| | Sbjct 6974 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033 Query 11070 AGCACTACGCGCGCCAGCTGTTTAAGACGGCGTACGTGCCGCTGGACAAGGAGGTGAAG 11128 || ||||| ||| || | | | || | ||||| || | ||||||||||| ||| Sbjct 7034 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120051456727644