Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 104 2e-17
seq2787 86.0 5e-12
>seq3424
Length=494560
Score = 104 bits (114), Expect = 2e-17
Identities = 172/245 (70%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100
|| ||||||| || || || || | ||| | |||||| || | || || ||||
Sbjct 289308 ACAAAAATTTG--CATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTT 289251
Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160
| ||||||||||| | ||||| ||| | || || |||||||| || ||||| ||||| |
Sbjct 289250 GAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCC 289191
Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACC 39219
||| ||||| | || | || ||||||| | ||| ||| || || | | | |
Sbjct 289190 TCTGTTGGTCAGGAGGAATGCCTTCTTTGT-CTTGAATTTTTGCCTTAACATTTTCTATT 289132
Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279
||||| | |||||| |||| |||||| |||| || ||||| || || ||||| |||
Sbjct 289131 GTATCAGAAGCCTCCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATT 289072
Query 39280 TGCAT 39284
|||||
Sbjct 289071 TGCAT 289067
>seq2787
Length=76071
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| || || |||||||| || || ||||| ||||||||||| | | ||| || |
Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || || ||||| || ||||| ||||| | ||| || || | ||| | | |||||||
Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830
Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249
|| ||| || || | | | | || ||| || ||| || || | |||||
Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770
Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||||| || || || ||||||||||| |||||
Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429523042010117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |