Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 147 5e-30
seq3424 138 3e-27
seq1305 138 3e-27
>seq2787
Length=76071
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | |||||| ||||| || | |||||| || | | ||| | |||||| || |||||
Sbjct 41306 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTCCAGCTG 41247
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| |||||||| || || |||||||| || || |||||||| || ||||||||||||||
Sbjct 41246 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 41187
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||| ||| || |||||||||| ||| || ||||| ||||| || || || ||
Sbjct 41186 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGT 41127
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| || | |||||
Sbjct 41126 CAGTGTCTTTACAAAGATCTGCAT 41103
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | || || || || |||||||||| ||||| || | || ||
Sbjct 40639 CGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTG 40580
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||||||||||||||| ||||| |||||||| |||||||| || || ||||||||
Sbjct 40579 CGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCC 40520
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| || ||||| ||||| ||| ||| ||| |||||||| || | ||||| || |
Sbjct 40519 TCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGA 40460
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | || || | || | ||||||
Sbjct 40459 GTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419
Score = 136 bits (150), Expect = 9e-27
Identities = 164/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || || || ||||| ||||| | ||| ||||| | || ||
Sbjct 39956 ACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGT 39897
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||||| || || ||||| || ||||| | ||||| || || ||||||||
Sbjct 39896 ACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACC 39837
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| ||||||||||||||| ||||||| |||||| ||||| || | || || |||||
Sbjct 39836 CTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAA 39777
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || || || || | ||| || | || | ||||||
Sbjct 39776 AGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734
Score = 134 bits (148), Expect = 3e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| | ||| ||||||||||||| ||||| || | || || | ||||||
Sbjct 40174 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 40115
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|||| ||||| || || || ||||| |||||||| || || ||||| ||||| ||||||
Sbjct 40114 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 40055
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| || |||||| ||| || ||||| || | ||| || ||||| || || ||
Sbjct 40054 TGGAT-TTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGT 39996
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||||| | || | ||||||
Sbjct 39995 TTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || | ||| ||||||||||||| || || || | || |||
Sbjct 41552 ACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGT 41493
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| |||| ||| || ||||| ||||| || || |||||||| || ||||| ||
Sbjct 41492 GCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCC 41433
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||||||||| ||| ||| |||||| ||||| || | ||||| || ||
Sbjct 41432 CTCCTTATCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAA 41373
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| ||||| || || | ||| ||
Sbjct 41372 AGTGATGGTCTTCCCAGTAAGAGTCTT 41346
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || ||||| |||| |||||| || | || || | ||||||
Sbjct 41086 AGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 41027
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || || |||||||||||||| |||||||| || || ||||| |||||||| |||
Sbjct 41026 TCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 40967
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| || ||| ||| ||||||||||| | || || || || || || ||
Sbjct 40966 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTT 40907
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || | ||||| | || | |||||||
Sbjct 40906 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874
Score = 122 bits (134), Expect = 2e-22
Identities = 164/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| ||||| ||||||||||| | ||| || || | | |||
Sbjct 39728 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGT 39669
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| | ||||| |||||||| || | |||||||| || || ||||| ||
Sbjct 39668 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 39609
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|||||||||||| || ||| || || ||| ||| || || || || | ||| || || |
Sbjct 39608 TTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCA 39550
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || || ||||| | ||||| | || | ||||||||
Sbjct 39549 AAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504
Score = 120 bits (132), Expect = 7e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || ||||| || | ||||||||| | |||||| | ||||||
Sbjct 40858 AGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCT 40799
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | ||||| ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 40798 TCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCC 40739
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| || ||| || || ||| ||||| ||||| || | ||| || || | || || ||
Sbjct 40738 TGTAT-TTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGT 40680
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| ||||| | || | ||||||
Sbjct 40679 CTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647
Score = 100 bits (110), Expect = 7e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || || || || || || || || |||| ||||| || | || ||
Sbjct 40411 CGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 40352
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | ||||| ||||| |||||||| || || || || || || || ||
Sbjct 40351 CGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCC 40292
Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| ||||||||||| ||| || || ||| ||| || || || |||| |||||| || |
Sbjct 40291 TCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAG 40233
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || ||||| || || | |||||
Sbjct 40232 GGTAATGGTCTTTCCAGTTAGGGTTTT 40206
>seq3424
Length=494560
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||| ||||| || |||| ||| || || | | || | ||||||||| | ||
Sbjct 288814 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAGAGTGTGCGCCCATCTTCCAATTG 288755
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || ||||| || |||| |||||| || || || || |||||||||||||| |||||
Sbjct 288754 CTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTT 288695
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
| ||| || |||||| || || || | |||||| || || ||||| || || || ||
Sbjct 288694 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 288635
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
|||||||||| ||| | ||||||
Sbjct 288634 TAAAGTTTTTACGAAGATTTGCAT 288611
Score = 136 bits (150), Expect = 9e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| || || || |||| ||| || || | ||| || | |||||||| || ||||| ||
Sbjct 290176 AGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCC 290117
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| || |||| |||||| || || ||||| |||||||||||||| |||||| |||
Sbjct 290116 GGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTT 290057
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||| || ||||| || | ||||| || || || || || ||||| ||||| ||
Sbjct 290056 AACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTGCCAGTCAATGT 289997
Query 225696 TTTTATGAACACTTGCAT 225713
||| | || | ||||||
Sbjct 289996 TTTCACAAAAATTTGCAT 289979
>seq1305
Length=286731
Score = 138 bits (152), Expect = 3e-27
Identities = 166/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| || ||||| || | |||||||| ||||| | ||||| || | ||| ||
Sbjct 24764 CGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTA 24823
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||||||||| || || ||||| ||||| | ||||| ||||| || |||||||||
Sbjct 24824 CGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCT 24883
Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| |||||||| ||| || || ||| ||| || || || |||| ||||| || |
Sbjct 24884 TCCTTATCTTGGAT-TTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAG 24942
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || || ||||| | || || | ||| | |||||||
Sbjct 24943 GGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192465361470446
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