Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq3063 192 1e-44 >seq3063 Length=7092 Score = 192 bits (212), Expect = 1e-44 Identities = 298/420 (71%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 10327 GGTGACCGCGTATGAGCAGACCGTGAAGGAGGAGGTGAACTTTCAGACGTCTTTTAACAA 10386 ||| |||||||| |||||||| ||||| ||||| | |||||||| | |||||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 10387 CAACGTGAGGACGCTGCTCTCCCGCGAAGAGGTGGCCGTGGGGCTCATGCATCTGTGGGA 10446 | ||||| | ||||| | | ||||| |||||||| | || || |||||||||||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 10447 CTTTGTGGAGGCCTATCTGGAG---AATCCGATGAGCAAGGCGCTCGCGGCACAACTGTT 10503 |||||| || | |||||| || || | |||||| ||||| ||| || ||||| Sbjct 6792 CTTTGT-AAG--CGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTT 6848 Query 10504 TCTGATAGTGCAGCACTGTCGCGACGAGGGCGTGCTCCGCGA-GAGCTTGCTTAACATAG 10562 || |||||||||||| | | ||| | | | || | || | || |||| ||||||| Sbjct 6849 CCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGC-TGCTAAACATAG 6907 Query 10563 CGGAGCCGGAGAGCCGGTGGCTCGTGGACCTTATAAATCTGCTGCAGACGATAGTGGTAC 10622 ||||| ||| |||| ||||| | || | ||||| | ||||||| |||||||| | Sbjct 6908 TAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGC 6967 Query 10623 AAGAGCGCCGGCTCGGACTCTCCGAAAAGGTGGCCGCCGTGAACTACTCCGTAATCACCC 10682 | |||||| | | | || | || |||||||||||| | ||||| ||| | ||| | Sbjct 6968 AGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTC 7027 Query 10683 TGAGCAAACACTACGCTAGGAAGATCTTCAAGTCTGTGTTCGTCCCCATCGACAAAGAGG 10742 || |||| ||||| | ||||| | | | | | ||| ||||| ||||| |||| Sbjct 7028 TGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGG 7087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104481053496216