Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 583 1e-161
seq1351 107 3e-18
>seq3345
Length=207354
Score = 583 bits (646), Expect = 1e-161
Identities = 1035/1497 (69%), Gaps = 17/1497 (1%)
Strand=Plus/Minus
Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821
|||||||| || || | ||||||||||| | | | ||| |||||||| |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881
||||||| || ||||||| ||||| |||| ||| |||||| || || |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941
||| |||| | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058
| | || || | |||| ||| | ||| | || || ||| | |||||||
Sbjct 113157 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 113098
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
||| || ||||| |||| |||||| | | || ||| | | || |||||| | |
Sbjct 113097 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 113038
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| |||| ||||||||||||| || ||||| | ||||||||| ||| | ||||
Sbjct 113037 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 112978
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | ||||||| |||| || | |||||| |||||||| ||||| ||||| || || | ||
Sbjct 112977 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCA 112918
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 112917 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAA 112858
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| |||| ||| ||||| | ||| || || || || || | || || | ||
Sbjct 112857 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 112799
Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || |||||| || | |||||| ||||||||| ||||||||| ||||| |||||
Sbjct 112798 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 112739
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|| |||||||||||||| || || | | ||||||| | ||||| ||| || |
Sbjct 112738 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 112679
Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536
| | | | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 112678 GAA-ATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 112620
Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596
||||||| |||| ||| |||| ||||| || | ||||||| |||||| || |||| |||
Sbjct 112619 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 112560
Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656
|| | |||| | || | || | || |||| ||| ||||| ||||||
Sbjct 112559 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTATT 112500
Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716
|| | |||||||||||| | ||||| || || || || || ||||| || |||| |
Sbjct 112499 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 112440
Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776
| ||||| | | ||| || || ||||| |||||||| |||||||| |||||||
Sbjct 112439 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 112380
Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836
||| || |||||| | || || | |||||||| | || | || || || || || |
Sbjct 112379 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCTAC 112320
Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || ||
Sbjct 112319 TTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 112264
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951
| | ||| |||||||| | |||||| ||||||||| ||||| || || ||| |
Sbjct 112263 GTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGCG 112205
Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011
| ||||| || |||| || ||||| | ||| | |||| | | |||| ||||
Sbjct 112204 AGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 112145
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
||||| ||||| |||||||||| ||| ||| || |||| | ||| |||||| ||
Sbjct 112144 ATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 112085
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
|| || ||||| || | ||| | || || | || || | |||||| || |||| |||
Sbjct 112084 CCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAATAA 112025
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
|| || | | || || ||||| || || || ||||||| ||||||||| || || |||
Sbjct 112024 ATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 111965
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248
|| |||||||||||||| | | ||| || || ||||| || |||| || |||
Sbjct 111964 TACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 111908
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
|||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||| |||||
Sbjct 111270 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAATTGTA 111211
Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652
| ||| ||||| || |||| |||| |||| | || ||| || |||| |||
Sbjct 111210 TTTAAAATCTCTATCATAAACAATAGCAGAGTCTAATTTGTCCTTGTTTTT 111160
>seq1351
Length=825266
Score = 107 bits (118), Expect = 3e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | |
Sbjct 602570 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 602629
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735
|||||||| |||||||||||||| |||||||| | | |||||||
Sbjct 602630 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 602678
Score = 100 bits (110), Expect = 4e-16
Identities = 183/262 (70%), Gaps = 11/262 (4%)
Strand=Plus/Plus
Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182
||| | ||||| ||| || |||||| || | | |||| |||| ||| ||| | |
Sbjct 601358 AAAAGCTTAAA---TAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGT 601413
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|| ||| || || | |||||||| || || |||||||| | ||||||||||| ||
Sbjct 601414 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGC- 601472
Query 48243 AAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC--- 48298
|||| | || || || ||||| || || || || ||||| || | | | |||||
Sbjct 601473 AAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAA 601532
Query 48299 -GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357
||| ||| ||| | || |||||| || ||||| || ||||||||||| ||||| |
Sbjct 601533 TGTAGCTGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATG 601591
Query 48358 GCATTGTTTCTATAGCATTAAA 48379
| | ||||| || ||||| ||
Sbjct 601592 GTAGAGTTTCAATTGCATTGAA 601613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694631383401760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |