Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 583 1e-161
seq1351 98.7 1e-15
>seq3345
Length=207354
Score = 583 bits (646), Expect = 1e-161
Identities = 1105/1611 (69%), Gaps = 19/1611 (1%)
Strand=Plus/Minus
Query 75357 TTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGAT 75416
|||||||| || || | || |||||||| | | | |||||||||||| |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 75417 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG 75476
||||||| || ||||||| ||||| |||| ||| |||||| || || |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 75477 AATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 75536
||| | || | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 75537 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 75596
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 75597 GTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATTG 75653
| | || || | |||| ||| | ||| | || ||||| | |||||||
Sbjct 113157 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 113098
Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713
||| || || || |||| |||||| | | || ||| | | || |||||| | |
Sbjct 113097 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 113038
Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773
| || | ||||||||||||| || ||||||| ||||||||| ||| | ||||
Sbjct 113037 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 112978
Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833
| | ||||||| |||| || | |||||| ||||| || ||||||||||| || || | ||
Sbjct 112977 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCA 112918
Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 112917 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAA 112858
Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953
| |||| || ||||| | ||| || || || || || | ||| || | ||
Sbjct 112857 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 112799
Query 75954 CATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012
| || |||||| ||| | || || |||||||||| ||| ||||| || ||||| |||
Sbjct 112798 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 112739
Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072
|| |||||||||||||| || || | | ||| ||| | |||| ||| || ||
Sbjct 112738 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 112679
Query 76073 GGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131
| | | | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 112678 GAA-ATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 112620
Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191
||||||| |||| ||| ||| ||||| || | ||| ||| |||||| ||| |||| |||
Sbjct 112619 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 112560
Query 76192 ATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC 76250
|| | |||| ||| || | || | || |||| ||| ||||| |||| |
Sbjct 112559 GTTTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTAT 112501
Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310
|| | |||||||| ||||| ||||| || || || || || || || || ||||
Sbjct 112500 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 112441
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370
| | ||||| | | ||| ||||| ||||| ||||| || ||||| ||||||||||
Sbjct 112440 CTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 112381
Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430
||| || |||||| ||||||| | |||||||| | | | || || ||||| || |
Sbjct 112380 TTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCTA 112321
Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--T 76486
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || |
Sbjct 112320 CTTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAAT 112265
Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA-TCATC 76545
|| || ||| |||||||| | ||||| ||||||||| ||||| || || ||| |
Sbjct 112264 CGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 112206
Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605
| |||||||| |||| |||||||| | ||| | |||| | | || | |||
Sbjct 112205 GAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTT 112146
Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665
|||||| ||||| |||||||||| ||| ||| || |||| | ||| |||||| ||
Sbjct 112145 CATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 112086
Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725
|| || ||||| || | ||| | ||| || | || || | |||||| || |||| |||
Sbjct 112085 ACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAATA 112026
Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785
||||| | |||| || ||||| || || || ||||||| |||||||||||| || ||
Sbjct 112025 AATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 111966
Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845
||| |||||||||||||| | | || || || ||||| || |||| || |||
Sbjct 111965 ATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGA 111906
Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
|| || | || | || || ||||| || || || |||||| ||||
Sbjct 111905 ACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 111846
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956
||||| |||| || || ||| | || || || || ||||| || ||||
Sbjct 111845 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 111795
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
|||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||| |||||
Sbjct 111270 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAATTGTA 111211
Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247
| ||| ||||| || |||| |||| | || | || ||||||||| | |||
Sbjct 111210 TTTAAAATCTCTATCATAAACAATAGCAGAGTCTAATTTGTCCTTGTTTTT 111160
>seq1351
Length=825266
Score = 98.7 bits (108), Expect = 1e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
|| |||| ||||||||||| || ||||| || || || || |||||||||||||| | |
Sbjct 602570 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 602629
Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224
|||||||| |||||||||| || || |||||||| | | |||||||
Sbjct 602630 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 602678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712895999570880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |