Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq3063 150 4e-32 >seq3063 Length=7092 Score = 150 bits (166), Expect = 4e-32 Identities = 242/345 (70%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 10095 GTTACAGCTTATGAACAAACAGTGAATGAGGAAGTGAACTTTCAGACCTCGTTTAACAAC 10154 ||||| || || || || || ||||| |||| | |||||||| | ||||||||| Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732 Query 10155 AATGTGCGCACGCTAATAGCCAGAGAGGAAGTGGTGGTAGGGCTGATGCATCTTTGGGAC 10214 | ||||||||||| | || | ||||| |||| |||| ||||||||||| |||||| Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792 Query 10215 TTTGTCCAGGCCTATTTAG-AGAACCCAATTAGCAAGGCTCTGACAGCACAGCTTTTTCT 10273 ||||| || | | || | ||||||| ||||||| | || | || ||||| || || Sbjct 6793 TTTGTA-AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 10274 CATCGTGCAACACTGCAGAGATGAGGGGGTATTACGGGAAAGCTTGCTTAATATTGCAGA 10333 || ||||| ||| |||| || | | || ||| |||| |||| || || | ||| Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911 Query 10334 GCCGGAAAGCAGGTGGCTGGTGGACCTGTTGAACCTGCTGCAGACAATAGTTGTGCAGGA 10393 ||| || || | |||||| | || || | ||| | ||||||| ||||| |||||||| Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971 Query 10394 GCGGGGCCTCTCGGTGGGAGAGAAAGTGGCTGCCATCAATTACTC 10438 ||| || | ||| || || ||||| ||||| || || || Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTC 7016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100612451460294