Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_032105.1
Length=33562
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 385 1e-102
>seq3063
Length=7092
Score = 385 bits (426), Expect = 1e-102
Identities = 338/421 (80%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 10833 GGTCAGCGCGTACGAGCAGACGGTGAAGGAGGAGATGAACTTCCAAAAGAGCTTTAACCA 10892
||| | ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| |
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 10893 CCACGTCCGCACCCTGATCGCGCGAGAGGAGGTGGCCATCGGGTTGATGCATCTGTGGGA 10952
|||||| ||||| || | ||||| ||||||||||| || || ||||||||||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 10953 CTTTGTGGAGGCTTTCGTGCAGAATCCCACCAGCAAGCCCCTGACGGCTCAGCTCTTTCT 11012
|||||| || | | ||| || || | |||||||| || | ||| ||||| || ||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11013 GATCGTGCAACACAGCCGCGAGAACGAGGCGTTTAGGGAGGCCATGCTTAACATCGCGGA 11072
|| ||||| |||||| | || |||||||| || ||||| || |||| ||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11073 GCCCGAGGGCCGCTGGCTCTTGGACCTGATTAACATCCTGCAGAGCATCGTGGTCCAGGA 11132
|||||||||||||||||| | || |||| ||||| ||||||||||| ||||| |||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11133 GCGCTCGCTGAGTCTGGCCGACAAGGTGGCGGCCATCAACTACAGCATGCTGTCCCTGGG 11192
|||| |||| ||||| ||||||||||| ||||| ||||| |||||| |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11193 CAAGTTTTACGCCCGCAAGATCTACAAGACCCCGTTCGTCCCCATAGACAAGGAGGTGAA 11252
||||||||||||||||||||| ||| | ||||| | ||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11253 G 11253
|
Sbjct 7092 G 7092
Score = 141 bits (156), Expect = 2e-29
Identities = 134/169 (79%), Gaps = 3/169 (2%)
Strand=Plus/Plus
Query 14999 CAAGATGTATGGGGGCGCGAAGAGACGCTCCGATCAGCATCCCGTGCGCGTGCGCGGGCA 15058
|||||||| ||| || || |||| |||||||| || || || |||||||||||||||||
Sbjct 8 CAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCA 67
Query 15059 CTTTAGGGCCCCCTGGGGCTCCCACAGCCGCGGACGGACGGTGGGCCGCACCACCGTGGA 15118
|| | || ||||||||| | |||| ||||| || || |||| ||||||||||| ||
Sbjct 68 CTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCAC--TGGG-CGCACCACCGTCGA 124
Query 15119 CGACGTCATTGACAGCGTGGTGGAGGAAGCCCGCAACTACCAGCCCGCG 15167
|||| ||||||| ||||||||||| || ||||||||| |||| ||
Sbjct 125 TGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACG 173
Score = 87.8 bits (96), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 15744 CTGTTGCACGCCTCCGCTCCGCGACGCAGGGTTAACTGGAAAGGGCGGAAAGTGCGGCGC 15803
||| ||||||| |||| || | || |||| | |||||||| || || | ||
Sbjct 777 CTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGT 836
Query 15804 GTGCTGCGGCCCGGCACGGTGGTGTCTTTCACTCCCGGGGAACGCTCCGCCTGGCGCGGA 15863
|| |||| |||||||| || ||| || ||||| || |||||| || |||
Sbjct 837 GTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACC---CGCACC 893
Query 15864 CACAAGCGCTCGTACGACGAGGTGTACGGCGACGAGGATATTCTCGAGCAGGCGTTAGAC 15923
|||||||| ||| || |||||||||||||||||||| | || |||||||| ||
Sbjct 894 TACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAG 953
Query 15924 AGGTCAGGGGAATTCGCGTACGGAAAGCG 15952
| ||||| || || |||||||||||
Sbjct 954 CGCCTCGGGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107271310713192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |