Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1351 147 2e-30 >seq1351 Length=825266 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 602225 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 602284 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 |||| ||||| || || || ||||||| || |||||| || | |||| | | | | Sbjct 602285 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 602344 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || ||||||||||||||| ||| |||||||| || | ||||| || ||||||| Sbjct 602345 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGATAAAAT 602404 Query 23957 GTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 || | ||| | | |||| | | |||||| Sbjct 602405 GTTTCTCACAATCTTTTAATGTCTCCCAATC 602435 Score = 96.9 bits (106), Expect = 4e-15 Identities = 126/173 (73%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 ||||| || |||||| || | | ||| |||||||| ||| | ||||||| || Sbjct 601367 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 601425 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || ||||| ||||| | ||||||||||| | ||||||||||| |||||| || || Sbjct 601426 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 601485 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 || || || |||||||| || ||||| || | | |||| |||||||| || Sbjct 601486 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGC 601538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521459911352600