Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq259364 134 3e-26 seq31747 89.7 1e-12 seq35919 84.2 5e-11 >seq259364 Length=501 Score = 134 bits (148), Expect = 3e-26 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAAC 230467 |||||| |||||| |||| || || | ||| ||| || || ||||||||||| || | Sbjct 496 CGAAAAAGAGTTCCTTTGCGATGC-ACTCCCGGTCAAGCTGATCGGCATGAACGCCGACC 438 Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 ||||| | ||||||||||| ||||| ||||||||| || ||||||| | ||| || || Sbjct 437 TTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTTGTTGCCGTCGGTAACCCGA 378 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | |||||| || ||||||| || | || |||||| | || || || || |||| Sbjct 377 AGCACTACAACGCTCAGAACCCGTTCGATTTCATGGAGATGATCTCCCTCGCCGGAAAGA 318 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTA-TCAGAGGCCTGGTGTGATGA 230638 ||||||| ||||| ||||| || ||||| || ||||| || || |||| Sbjct 317 CCAACTTTTTCGAGAAGCGCGTTTCCGACTACGCAAAGGCC-GGCGTCATGA 267 >seq31747 Length=4812 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 73 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13 CCCACGTTGGGC 2 >seq35919 Length=1689 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 319471 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA-ACGTCCTT 319529 ||||| || ||| ||||| || |||||| || || || | ||| | ||| | Sbjct 1130 GTGCACACCTTGTCAAGGAAGCCACTGTCGTGGGAGACGATGATCGACGTGCAGGTCGTC 1189 Query 319530 AAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 319589 ||| | | | ||||| || |||| |||| ||||| ||| |||||||||||||| Sbjct 1190 AAGCTGG-TAAGGTAGTCCATCAGCCACTGGACGTTGAGCACGTCGAGATGGTTGGTCGG 1248 Query 319590 CTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 319649 ||||||||| ||||| | | || || | ||||| || || || || ||||| ||||| Sbjct 1249 CTCGTCAAGGAGCAGGATGTCAGCCTTGAAAAGCATAGCGCGCGCGAGGGCGAGCTTCAT 1308 Query 319650 TTTCCACCCTCCGGAAAG 319667 ||||| || ||||| || Sbjct 1309 CTTCCATCCACCGGAGAG 1326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1054068591580290