Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq259364 134 3e-26
seq31747 89.7 1e-12
seq35919 84.2 5e-11
>seq259364
Length=501
Score = 134 bits (148), Expect = 3e-26
Identities = 172/232 (74%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAAC 230467
|||||| |||||| |||| || || | ||| ||| || || ||||||||||| || |
Sbjct 496 CGAAAAAGAGTTCCTTTGCGATGC-ACTCCCGGTCAAGCTGATCGGCATGAACGCCGACC 438
Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527
||||| | ||||||||||| ||||| ||||||||| || ||||||| | ||| || ||
Sbjct 437 TTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTTGTTGCCGTCGGTAACCCGA 378
Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587
| |||||| || ||||||| || | || |||||| | || || || || ||||
Sbjct 377 AGCACTACAACGCTCAGAACCCGTTCGATTTCATGGAGATGATCTCCCTCGCCGGAAAGA 318
Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTA-TCAGAGGCCTGGTGTGATGA 230638
||||||| ||||| ||||| || ||||| || ||||| || || ||||
Sbjct 317 CCAACTTTTTCGAGAAGCGCGTTTCCGACTACGCAAAGGCC-GGCGTCATGA 267
>seq31747
Length=4812
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 73 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 13 CCCACGTTGGGC 2
>seq35919
Length=1689
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 319471 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA-ACGTCCTT 319529
||||| || ||| ||||| || |||||| || || || | ||| | ||| |
Sbjct 1130 GTGCACACCTTGTCAAGGAAGCCACTGTCGTGGGAGACGATGATCGACGTGCAGGTCGTC 1189
Query 319530 AAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 319589
||| | | | ||||| || |||| |||| ||||| ||| ||||||||||||||
Sbjct 1190 AAGCTGG-TAAGGTAGTCCATCAGCCACTGGACGTTGAGCACGTCGAGATGGTTGGTCGG 1248
Query 319590 CTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 319649
||||||||| ||||| | | || || | ||||| || || || || ||||| |||||
Sbjct 1249 CTCGTCAAGGAGCAGGATGTCAGCCTTGAAAAGCATAGCGCGCGCGAGGGCGAGCTTCAT 1308
Query 319650 TTTCCACCCTCCGGAAAG 319667
||||| || ||||| ||
Sbjct 1309 CTTCCATCCACCGGAGAG 1326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1054068591580290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |