Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq253728 80.6 5e-11 >seq253728 Length=404 Score = 80.6 bits (88), Expect = 5e-11 Identities = 145/212 (68%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 2825 GTTGAACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTTGAGGGTGTCGA 2884 |||| | ||||||| | |||| | ||||| ||| |||| || || || || ||||| Sbjct 281 GTTGCGCCGCTCGCCGGTCCAGTATGGATAGGCGGGGTGCAGCACGGTCGATGGCGTCGA 222 Query 2885 AAAGTAGGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTT 2944 |||||||||| ||| | ||| |||| ||||| ||||||||||| ||| ||||| Sbjct 221 AAAGTAGGTTTTTCGCCACTTCTTGTGCGTCGCCATCCCCGAGGCGACCTTGTTCAGCTC 162 Query 2945 CTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGAGC 3004 || || | | | |||||| | || |||| || | | ||||| | | ||| || Sbjct 161 CTCGAAGCTGTGAACCCAGAAGAACTCGTCGAAGTAGAAATTGCCGTGCCGCCCCTGCGC 102 Query 3005 CGTGTTGGAGTTGGTACCGAGAAAAATCAGCT 3036 ||| |||| || ||||| || ||||| Sbjct 101 GGTGCGAAAGTTCGTGCCGAGGAAGTGCAGCT 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97553155295756