Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq93232 91.5 1e-13 >seq93232 Length=5940 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 101745 CTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATG 101804 ||| || ||| | |||||||||||| || || |||| ||| ||||| ||||| || | Sbjct 4107 CTAAATCAGTTATATGAGCAATCATATGTGTCAATAGAGCATAACTAGCCATGTTGAAAG 4166 Query 101805 GCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCAC 101864 | | || | |||||||| || |||||| |||| ||| |||||||||||| | Sbjct 4167 GAATACCAAGACCCATATCTGCGCTTCTTTGGTACATCATACAAGAAAGCTTTCCACTAG 4226 Query 101865 AGACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAA 101923 | |||| ||| || ||| || | ||||| || || | ||||||| | ||||| Sbjct 4227 ATACATGAAACTGTACTAAACA-GTGACATGGAGGAAGTGCCATTTTGCTTAAATCTGAG 4285 Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATC 101955 |||||| || || | ||||||||||| || Sbjct 4286 GGATTCCATGCGCATACCAACATCCTTCTGTC 4317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360031273098833