Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 194 1e-44
seq27511 107 2e-18
seq28654 105 6e-18
seq27512 91.5 1e-13
seq76306 86.0 5e-12
seq41046 86.0 5e-12
>seq10526
Length=5062
Score = 194 bits (214), Expect = 1e-44
Identities = 435/645 (67%), Gaps = 29/645 (4%)
Strand=Plus/Plus
Query 105997 GGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056
|||||||| |||||||| || || |||||||||||||| || ||||| || |||||||||
Sbjct 3633 GGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 3692
Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGT-TTCT------TTTTTCAAC 106109
|| | | ||||| ||||| || || | ||||| ||| |||| ||| |||||
Sbjct 3693 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAAC 3751
Query 106110 ATCGTGCATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTT 106169
| ||| | || || || | || ||||| || || || || |||||||| ||
Sbjct 3752 T------AAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTT 3805
Query 106170 TAAATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTC 106229
|| | ||| ||| |||| | ||| || || ||||| |||||||| || |||||
Sbjct 3806 CAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTC 3865
Query 106230 GTTCCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGC 106289
|||||| | |||| |||||||| |||||||||| || ||||| |||||||| || |
Sbjct 3866 GTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGA 3925
Query 106290 AACTTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTAT 106349
|||||||| || || || || | || |||| || | | || || || || ||
Sbjct 3926 GACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGAT 3985
Query 106350 CGTTTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAA 106409
| ||| | || || || || || |||||||| || || || || || || | |||
Sbjct 3986 CTCTTTTAAACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAA 4045
Query 106410 GTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCA 106469
|| | | ||| || | || | || ||||| || || | || ||||||||
Sbjct 4046 ATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCA 4105
Query 106470 CTCAACAAAGTACGCAGCGACAATTTTATCC---TCTCT-CCTGCCAGGTTTGTTGTTTT 106525
|| || ||||| ||| | |||| ||| ||| | | | | || || || || ||||
Sbjct 4106 TTCTACGAAGTAGGCACCCACAACTTT-TCCAGATGTTTGCTTGAACGGCTTATTTTTTT 4164
Query 106526 CCAGCCATGTGTATTCGAGCGGTGCCAGATGGCCGCCGTCGGTGTCTGCGACTTTGACCA 106585
| | |||| ||||| || || | | ||| | || ||||| || || || ||| |
Sbjct 4165 CTCCCAATGTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGCCAC---GACAA 4221
Query 106586 ACAC---GGGATCGCT--CACGGAACAGCCGTCCTCATTGCAAAG 106625
| |||||| || || | |||||||| |||||||||||
Sbjct 4222 TTTCGGTGGGATCACTTGAACTG--CAGCCGTCTTCATTGCAAAG 4264
>seq27511
Length=800
Score = 107 bits (118), Expect = 2e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| || | || ||| |||| ||||| || || || ||| |||| | |
Sbjct 444 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 503
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || ||||| |||||| |||||||| ||| | ||| ||||||
Sbjct 504 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 563
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138
||||||||||| ||||| || || || || |||||| | | ||||| | || |||
Sbjct 564 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 621
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGT 29170
||||||||||||||||| ||| | ||| ||||
Sbjct 622 AATATTCAGAAGGAATCAACTTTGCACCTGGT 653
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| || | || ||| |||| |||||||| || || ||| |||| | |
Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || ||||| ||| ||| || |||||||| | || || ||
Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
||| || ||||| ||||| || ||||| ||||||||| || || | ||||| ||
Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATAA 395
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTG 29171
||||||||||||||||||| | ||| |||||
Sbjct 396 TATTCAGAAGGAATCTACTTTGCACTTGGTG 426
Score = 89.7 bits (98), Expect = 4e-13
Identities = 105/139 (76%), Gaps = 5/139 (4%)
Strand=Plus/Plus
Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099
||||||||| || |||||||| || | ||| |||||| ||||||||||| |||||
Sbjct 68 AAGCAAAAA-TTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAAAGACTTATTTTTGCT 126
Query 29100 GGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTA 29157
|| || || || |||||| | | ||||| | |||||||| |||||||| |||||||
Sbjct 127 GGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTACAACATTCAGAAAGAATCTA 184
Query 29158 CTCTTCACATGGTGTTACG 29176
|| | ||| | || ||||
Sbjct 185 CTTTGCACCTAGTACTACG 203
>seq28654
Length=3315
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||||||||| |||||||| | || || ||||| || || ||| || || |
Sbjct 1247 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 1188
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
||| || | | || |||| || ||| ||||| ||||| | || ||||||
Sbjct 1187 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 1128
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|||| | |||||||| || || ||||||||||||||| | || || | || |||||
Sbjct 1127 ACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 1068
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||| ||||| || || || |||||| |||| | || | ||||||||
Sbjct 1067 TATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 1020
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || | || ||| |||| || ||||| || || ||| |||||| ||
Sbjct 1018 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 959
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || |||| || || || ||||| ||| | ||| |||||||
Sbjct 958 GACACTATTGAAAATGTTAAAGCTAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 899
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | || || || || ||||| || ||||| ||| | ||| | | || || |||
Sbjct 898 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTATAAT 839
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||| || || ||| | ||| |||| ||||| |||||||||||
Sbjct 838 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 792
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||||||||| ||||||||||||| || || ||||||||| ||| ||||| |
Sbjct 1474 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1415
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | || ||||| ||||| || || | ||| ||| |||
Sbjct 1414 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 1355
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | || || ||||| || || ||| |||||||| ||| || | |||||||||
Sbjct 1354 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1295
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171
|||||||| || || || || ||| | |||
Sbjct 1294 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 1265
Score = 86.0 bits (94), Expect = 5e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
|| ||||| ||| | ||| ||||||||| || ||||| ||||| || ||||||||||||
Sbjct 2293 GACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTTATTTTTGCTGGAAAACAACTGGAA 2234
Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164
||| | || | | ||||| |||||||| ||||||||||| || ||
Sbjct 2233 GATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATCTACCCTACA 2184
>seq27512
Length=242
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/201 (71%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||||||||| | || ||| |||| ||||| || || || ||| || ||| |
Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || ||||| ||||||| ||||| ||||| | || ||| ||
Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 109
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138
|||||| ||||| ||||| || || || || || ||| | | ||||| | || |||
Sbjct 108 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTAT--CAGACTAC 51
Query 29139 AATATTCAGAAGGAATCTACT 29159
||||||||||| |||||||||
Sbjct 50 AATATTCAGAAAGAATCTACT 30
>seq76306
Length=316
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| | ||||| || || || |||||||| || ||| |||| | |
Sbjct 57 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 116
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | ||| ||| ||| || || ||||| | || |||||||
Sbjct 117 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 176
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||||| || || || || || |||||||||||| || || | || || |||
Sbjct 177 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 236
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|| ||||||||||||||| | ||| | || || ||
Sbjct 237 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTGCG 271
>seq41046
Length=7774
Score = 86.0 bits (94), Expect = 5e-12
Identities = 163/238 (68%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 28953 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 29012
||| | | ||||||||| ||| |||| || | ||||| |||||||||||| ||| |
Sbjct 7391 AGTCTCACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTG 7332
Query 29013 GAACCCGCAGAGACGGTGGCCGATCTT--AAGCAAAAAATTGCCGATAAAGAAGGTGTGC 29070
|| || | || || | | || || |||| ||||| ||||| |||||| | |
Sbjct 7331 GAGGCCTCTGATACTATAGAAAATGTTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTC 7273
Query 29071 CCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGG 29130
| ||| || ||| | | |||||||| || |||||||| |||||| || ||
Sbjct 7272 CACCAGACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGT 7213
Query 29131 CCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
| || ||||| ||||| |||||||| || | || | ||| | ||| | || |||||
Sbjct 7212 CTGACTACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGG 7155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426889531146365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |