Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq61277 161 1e-34 seq263247 129 7e-25 seq76033 118 1e-21 >seq61277 Length=456 Score = 161 bits (178), Expect = 1e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCT 145747 |||| | ||||||| ||| | |||||| || |||||| |||||||||||| || || | Sbjct 436 GCTCGAGGTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCGGTT 377 Query 145748 CGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGG 145807 || || | |||||||||| || |||||||| |||| || |||||||| | Sbjct 376 GCAGACCGACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGAACG 317 Query 145808 GCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG 145867 ||||||| || | |||| ||||||| |||||||||||||| ||||||| ||| | | Sbjct 316 GCACCCCGAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGTCGG 257 Query 145868 CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 | |||||||||||| |||| |||||| ||||| || |||||| Sbjct 256 CGACGTAGAACTGGAACAGCGAGTGGCACGGCGGTAGCGCCATG 213 >seq263247 Length=570 Score = 129 bits (142), Expect = 7e-25 Identities = 197/277 (71%), Gaps = 8/277 (3%) Strand=Plus/Plus Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||| || ||| ||| || || | || |||| |||| ||| ||||| | ||| Sbjct 222 GATGAACTCGCCGACCTCCAGCCCGCATTGCTGCGCGAGGATGTGGGTGAGCAGCGCGTA 281 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||| ||||| || || ||||| |||||||||||||| |||||| Sbjct 282 GCTGGCGATGTTGAACGGCACGCCGAGGAAGATGTCGCCCGAGCGCTGGTAGAGCTGGAG 341 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || |||| ||| ||| |||| |||| ||||| |||||||| | || ||||| Sbjct 342 CGACAGCTTGCCGTTCGCGACGTGCGTCTGGAACAGGCAATGGCAGGGTGCGAGCGCCAT 401 Query 145911 GGCGGGCAGGTCCGCCGGG-TTCCAGGCGGTGAGGACGAGCCTCCTGCTC---TCGGGGT 145966 ||| |||||| ||||||| ||||| ||| | |||| | | || | |||||| Sbjct 402 CGCGTGCAGGT-CGCCGGGATTCCATGCGCT---AACGATCTGGCGGCGCGAGGCGGGGT 457 Query 145967 TCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTC 146003 | ||||||||| || ||||| || || |||||| Sbjct 458 TGGTCTTGATCTGGCCGATCAGCTCGGCGATCTGGTC 494 >seq76033 Length=7108 Score = 118 bits (130), Expect = 1e-21 Identities = 184/258 (71%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGCTC 145748 || ||||||||| ||||| ||| |||||| | || | | ||| || ||| ||| Sbjct 6533 TCGACGTGGTTGTCGTAGATGTGGCAGTCCCCGCCGGTCCAC-ACGAACTCACCGACCTC 6475 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 |||||| | | ||| | ||||| ||| ||||||| ||| || |||||||| || Sbjct 6474 GAGGCCGGCCTGCGCGGCCATCATGTGGGTGAGCAGGGCATAGGACGCGATGTTGAACGG 6415 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGC 145868 ||| || || || ||| | |||||| || |||||||||||||| | ||| | || Sbjct 6414 CACACCGAGGAACAGGTCGGCACTGCGCTGATAGAGCTGGCAGGAGAGTTTTCCGTCGGC 6355 Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGGGCAGGTCCGCCG 145927 |||||||||||| | | | |||||| ||||||| ||||| ||||| | ||| || Sbjct 6354 GACGTAGAACTGGAAGAAGGCGTGGCACGGCGGCAACGCCATCTGCGGG-ATCTCCCCCA 6296 Query 145928 GGTTCCAGGCGGTGAGGA 145945 ||||||||||| || || Sbjct 6295 CGTTCCAGGCGGAGACGA 6278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588033046875320