Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 185 7e-42
seq133356 114 1e-20
seq28654 107 2e-18
seq27511 100 2e-16
seq27512 96.9 3e-15
seq76306 95.1 1e-14
seq41046 95.1 1e-14
seq5960 95.1 1e-14
>seq10526
Length=5062
Score = 185 bits (204), Expect = 7e-42
Identities = 298/426 (70%), Gaps = 2/426 (0%)
Strand=Plus/Plus
Query 102539 CCGAGCGCCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCG 102598
||||| | ||||| || || ||||| || || |||||||||||||| || || || |||
Sbjct 3624 CCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCG 3683
Query 102599 AAAAACTTCCACACCTGCAAAAACTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTC 102657
|| || ||||| | | |||||| || || || | ||||| || | | |||
Sbjct 3684 AAGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGA 3742
Query 102658 CGCGTCGTGCATGAAATAGAACGGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGAT 102717
||| | || |||| || |||| |||||||| || ||||| || || || ||
Sbjct 3743 TTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAAT 3802
Query 102718 TTTCAAATGCGGGTTTGCCAGCTTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGG 102777
||||| | ||| || | || | ||| || |||||||||||||||||||||||
Sbjct 3803 CTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGG 3862
Query 102778 CTCGTTCCATGCGGATACGCCCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGAT 102837
||||||||||| || | || ||||| || ||||||| || ||||| || ||||||||
Sbjct 3863 CTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGAT 3922
Query 102838 AGCGACCTTAAAGTCTGCGCGGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCCGGG 102897
| ||| || ||||| | ||||| | || || ||||| || |||| ||||||||
Sbjct 3923 TGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTC 3982
Query 102898 AATGGTCTTGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAG 102957
|| || | || || | ||||| ||||||||||| || || |||||||| ||
Sbjct 3983 GATCTCTTTTAAACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAG 4042
Query 102958 CAGATG 102963
|| |||
Sbjct 4043 CAAATG 4048
>seq133356
Length=434
Score = 114 bits (126), Expect = 1e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 29354 CGCACAAACGGACACTGCGGCGCCCACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTT 29413
|||| || || ||||| |||||||| |||| ||||||| | | || |||||||||
Sbjct 91 CGCAGGAAAGGGCACTGAGGCGCCCAGCGCTGGTGGTCCTTGGCGGGATCGTCGCCCGCA 150
Query 29414 ACCCAATTCGTAATCTCTACCTTGCAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAG 29473
||||| ||| |||| ||||| || |||||||||||||| || || |||||||||||||
Sbjct 151 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGA 210
Query 29474 TAGTAGAACCC 29484
|| ||||| ||
Sbjct 211 TAATAGAAGCC 221
>seq28654
Length=3315
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | || || | ||| | || ||||||||||| ||||| ||||| |
Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || |||| || || || ||| | ||||| | |||||| || ||
Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| ||| || ||| || | | | ||||||| ||| ||| |
Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1883
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || |||| ||||| ||||| || |||||
Sbjct 1884 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| || | ||||||||| || || ||||| ||||||||||||| ||| || || | |||
Sbjct 579 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCC 638
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| | |||||| || ||| | || || | ||| ||||| ||| | ||| ||||||||
Sbjct 639 TCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 698
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | ||| ||| || |||||| |||| || ||||||
Sbjct 699 TGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTC 758
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | || || ||||| || |||||
Sbjct 759 TTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | ||||| | |||| || ||||| || ||||| || || || |
Sbjct 1246 TTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAG 1305
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || |||| || || || ||| |||| || | ||| ||||| ||
Sbjct 1306 ACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGG 1365
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| ||||| || || || ||| || | ||| || ||| || ||
Sbjct 1366 GGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTA 1425
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| |||||||||||| || || || ||||||||||||||||||||
Sbjct 1426 CTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 1474
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | || || | ||| | || ||||| ||||| ||||| ||||| | |
Sbjct 1476 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 1535
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || || ||||| ||||| ||| | ||||| | || || || |||
Sbjct 1536 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 1595
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || || || || ||||| || || | | | || ||| ||||||
Sbjct 1596 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 1655
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || |||||||| |||| || |||||||||||||||||
Sbjct 1656 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702
>seq27511
Length=800
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||||| || ||||| ||||| ||||| || | || || | | ||
Sbjct 428 AGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATCT 369
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
||||||||||| || ||| ||||||| ||||| ||||| || | |||||| |||||
Sbjct 368 TCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCT 309
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | |||||| | ||| ||||| || || ||
Sbjct 308 TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 249
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| || | || || ||||| |||||||||
Sbjct 248 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216
>seq27512
Length=242
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | || || | ||| ||||| || || || ||||| || ||||| |
Sbjct 1 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 60
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||| ||||| || || ||| ||||||| || || ||||| ||
Sbjct 61 AGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 120
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||| || || ||| || || | ||| || ||| |||||| |
Sbjct 121 ATGCCTTCCTTATCTTGAATTTTTGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 180
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| || || |||||||| || | || || |||||||||||||||
Sbjct 181 TCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 228
>seq76306
Length=316
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
|||||||| || ||||| || || |||||||| | || || | | || ||||| ||
Sbjct 259 TGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGC 200
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || || |||| ||||| || || || || | |||||||||||| ||||||
Sbjct 199 TTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTT 140
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
|| || | ||| |||||| | ||| ||||| || ||||| || || |||
Sbjct 139 GCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTT 80
Query 21153 AACGTTTTGACAAATATTTGCATTTTGAATCTCTTATAAA 21192
|| ||||| || || |||||||| ||||||| | | |||
Sbjct 79 AAAGTTTTTACGAAGATTTGCATGATGAATCTGTAAAAAA 40
>seq41046
Length=7774
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/238 (69%), Gaps = 3/238 (1%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| || || || || | ||||| | |||||| ||||| |||||||||||||| |||||
Sbjct 7151 GTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTC 7210
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | | || || || ||||| || ||| | || | | ||||||||
Sbjct 7211 AGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGG 7270
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTG--TTTCACCTGGCCGACAGTATCACCGGGC 21122
|| | |||||||| || ||| ||| | ||| || | | | ||||||| || |
Sbjct 7271 TGGAATACCTTCCTTATCTTGGAT-TTTAGCTTTTAACATTTTCTATAGTATCAGAGGCC 7329
Query 21123 TCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
||| || | ||||||||| || || || | || ||||| || ||||||||| |||
Sbjct 7330 TCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 7387
>seq5960
Length=5068
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788
|||||||| |||||||||||| ||||| | |||| | | ||||||| |||||||||
Sbjct 3603 GGCGGCGTAGGGCTGAACCTGTGCGGCGCGAGCCACCTGCTGCTGCTGGACCCGCACTGG 3544
Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAGA 38840
|||||||| | ||| |||||| || |||||| | ||||| |||| ||||
Sbjct 3543 AACCCGCAGCTGGAGGAGCAGGCACAGGACCGCGTGTACCGCGTGGGGCAGA 3492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420833252190428
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