Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_002484.2
Length=56426
Score E
Sequences producing significant alignments: (Bits) Value
seq276787 136 1e-27
seq101952 109 2e-19
>seq276787
Length=256
Score = 136 bits (150), Expect = 1e-27
Identities = 180/250 (72%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 5290 CTGGCCGAGTTCCCGGCCAGCGGTATCGTGCTCAACCCCATCGACTGGGCGCTGATCGAG 5349
||||| |||| |||||| | ||||||| ||||| |||||||||||| ||||||
Sbjct 5 CTGGCGGAGTATCCGGCCTCGGCCTTCGTGCTGAACCCGATCGACTGGGCGACGATCGAA 64
Query 5350 CTGAACAAGGACGCCGAGAACCGTTACATCATCGGCAGCCCGCAGAACGGCACCACTCCG 5409
|| | |||||| || || ||| |||||||||||| |||| | ||| |||
Sbjct 65 CTCACGAAGGACACCCAGGGCCGCTACATCATCGGCGACCCGGCCGAGGGCGTGCAGCCG 124
Query 5410 ACCCTCTGGCGTCTGCCGGTGGTGGAAACCCAGGCCATCACTCAGGACGAGTTCCTGACC 5469
|| ||| ||||||||||| | |||||||| | ||| || |||||| |||
Sbjct 125 CGGCTGTGGAACCTGCCGGTGGTCGCGACCCAGGCGCAGGCGCAGAACCGGTTCCTCACC 184
Query 5470 GGTGCGTTCTCTCTCGGCGCCCAGATCTTCGACCGCATGGACATCGAGGTTCTGGTTTCC 5529
|| || ||| | ||| || ||||||||||| |||||||| |||||||| || | ||
Sbjct 185 GGAGCCTTCGATATCGCGGCGCAGATCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCG 244
Query 5530 ACCGAGAACG 5539
||||||||||
Sbjct 245 ACCGAGAACG 254
>seq101952
Length=1540
Score = 109 bits (120), Expect = 2e-19
Identities = 130/174 (75%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 48904 TCGCGCCAGATGAAGCTGTTGGCCAGGGAGATCG-GATGCCCGGTGCTCCCGCTCTGCCA 48962
|| || ||||| |||||| |||||| |||| ||| ||| |||| | || |||||| |||
Sbjct 865 TCCCGGCAGATCAAGCTGCTGGCCAAGGAGCTCGAGAT-CCCGATCGTCGCGCTCTCCCA 807
Query 48963 GCTCAACCGCGGATGTGAGTCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGA 49022
||||||||| || ||| | ||| | || |||||||| || | |||||| |||||
Sbjct 806 GCTCAACCGTGGCCCCGAGACCCGCGCCGACAAGCGCCCCATGATGGCCGACCTGCGCGA 747
Query 49023 GTCCGGCGCCATCGAGCAAGACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076
||||||| | | ||||| ||||| |||||| | || | || ||||||| ||
Sbjct 746 GTCCGGCTCGCTGGAGCAGGACGCCGACATCATCATCCTGCTGCACCGCGAGGA 693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179847882064248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |