Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq276787 136 1e-27 seq101952 109 2e-19 >seq276787 Length=256 Score = 136 bits (150), Expect = 1e-27 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 5290 CTGGCCGAGTTCCCGGCCAGCGGTATCGTGCTCAACCCCATCGACTGGGCGCTGATCGAG 5349 ||||| |||| |||||| | ||||||| ||||| |||||||||||| |||||| Sbjct 5 CTGGCGGAGTATCCGGCCTCGGCCTTCGTGCTGAACCCGATCGACTGGGCGACGATCGAA 64 Query 5350 CTGAACAAGGACGCCGAGAACCGTTACATCATCGGCAGCCCGCAGAACGGCACCACTCCG 5409 || | |||||| || || ||| |||||||||||| |||| | ||| ||| Sbjct 65 CTCACGAAGGACACCCAGGGCCGCTACATCATCGGCGACCCGGCCGAGGGCGTGCAGCCG 124 Query 5410 ACCCTCTGGCGTCTGCCGGTGGTGGAAACCCAGGCCATCACTCAGGACGAGTTCCTGACC 5469 || ||| ||||||||||| | |||||||| | ||| || |||||| ||| Sbjct 125 CGGCTGTGGAACCTGCCGGTGGTCGCGACCCAGGCGCAGGCGCAGAACCGGTTCCTCACC 184 Query 5470 GGTGCGTTCTCTCTCGGCGCCCAGATCTTCGACCGCATGGACATCGAGGTTCTGGTTTCC 5529 || || ||| | ||| || ||||||||||| |||||||| |||||||| || | || Sbjct 185 GGAGCCTTCGATATCGCGGCGCAGATCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCG 244 Query 5530 ACCGAGAACG 5539 |||||||||| Sbjct 245 ACCGAGAACG 254 >seq101952 Length=1540 Score = 109 bits (120), Expect = 2e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 48904 TCGCGCCAGATGAAGCTGTTGGCCAGGGAGATCG-GATGCCCGGTGCTCCCGCTCTGCCA 48962 || || ||||| |||||| |||||| |||| ||| ||| |||| | || |||||| ||| Sbjct 865 TCCCGGCAGATCAAGCTGCTGGCCAAGGAGCTCGAGAT-CCCGATCGTCGCGCTCTCCCA 807 Query 48963 GCTCAACCGCGGATGTGAGTCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGA 49022 ||||||||| || ||| | ||| | || |||||||| || | |||||| ||||| Sbjct 806 GCTCAACCGTGGCCCCGAGACCCGCGCCGACAAGCGCCCCATGATGGCCGACCTGCGCGA 747 Query 49023 GTCCGGCGCCATCGAGCAAGACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 ||||||| | | ||||| ||||| |||||| | || | || ||||||| || Sbjct 746 GTCCGGCTCGCTGGAGCAGGACGCCGACATCATCATCCTGCTGCACCGCGAGGA 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179847882064248