Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq157993 123 4e-23
seq28654 120 5e-22
seq76306 111 2e-19
seq27512 107 3e-18
seq27511 107 3e-18
seq100037 86.0 9e-12
>seq157993
Length=1288
Score = 123 bits (136), Expect = 4e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 10506 GTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAA 10565
|| || || ||||| || | ||||| | ||||| | ||||| |||||||| | ||||
Sbjct 1 GTCATAGATGAAGACTACCGTGGAAACATTGGAGTGGTGTTATTCAATCATTCCAGTGAA 60
Query 10566 GATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAATTTTATAT 10625
|||||| | | || | ||| |||||||| ||||| |||||||||||| |||||| ||
Sbjct 61 GATTTTGCAGTTAAAAAAGGTGATAGAATTGCTCAACTAATATGTGAAAGAATTTTCTAC 120
Query 10626 CCTAAAATGTTAAAAGTCGATAGTTTATCAGAAACAAAAAGATCTGATTTTGGTTTTGGA 10685
|| | || | |||| || | | ||||||||||||||||| || |||||||||
Sbjct 121 CCAGATATAGTTGAAGTTGACAATCTATCAGAAACAAAAAGAGGGGAAGGTGGTTTTGGG 180
Query 10686 TCTACTGG 10693
||||| ||
Sbjct 181 TCTACAGG 188
>seq28654
Length=3315
Score = 120 bits (132), Expect = 5e-22
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | |||||||| || | |||||||||||| |||||||| || |
Sbjct 2386 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 2445
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||| | | || || ||||| |||||||| |||||||| | ||| ||||| ||||
Sbjct 2446 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 2505
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| ||||| || ||||| |||||| ||| ||| |
Sbjct 2506 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 2565
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|||| | || || |||||||| || | |||||| | || || ||||||||
Sbjct 2566 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/227 (67%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | | | ||| || || |||||||||||||| || || || || ||
Sbjct 1932 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 1991
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| |||||||| || || |||||||| | | ||| ||||||||||||
Sbjct 1992 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 2051
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| || || ||| ||| |||
Sbjct 2052 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 2111
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || |||||||| || || | |||||||| || ||||||||
Sbjct 2112 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
||||| ||||||| |||||||| ||| || ||||||||||| || | || | || |||
Sbjct 2175 AATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATCAGATAATGTACGGCCATC 2233
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| | |||||||||||||||||| | || || ||||| || ||||| || ||||| ||
Sbjct 2234 TTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTC 2293
Query 146185 TTG 146187
|||
Sbjct 2294 TTG 2296
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | | ||| ||||| |||||||||||||| || ||||| || ||
Sbjct 564 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 623
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | || ||| ||||| ||||| |||||||| || | | || || || || |||
Sbjct 624 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 683
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 684 ATGCCCTCCTTGTCTTG 700
>seq76306
Length=316
Score = 111 bits (122), Expect = 2e-19
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| || || | || || || || ||||||||||| || |||||||| ||||
Sbjct 285 TTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTG 226
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | || | | ||| || | ||| ||||| || ||||||| |||||| ||||| ||||
Sbjct 225 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 166
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| ||||| || ||||| ||||| ||| ||| |
Sbjct 165 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 106
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| | |||||| ||||| || ||||| ||||| | ||| ||||||||
Sbjct 105 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57
>seq27512
Length=242
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || | | ||| |||||||||||||||||||| ||||| || |||||
Sbjct 1 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 60
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | || |||||||||||||| | ||||| || || ||||||
Sbjct 61 AGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 120
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||||||
Sbjct 121 ATGCCTTCCTTATCTTG 137
>seq27511
Length=800
Score = 107 bits (118), Expect = 3e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | || ||| | || |||||||||||||| || || ||||| |
Sbjct 217 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 158
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| || | || |||||||||||||| | |||||||||||| || |
Sbjct 157 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 98
Query 146169 GAATTCCTTCTTTATCTTG 146187
||||||| |||||||| ||
Sbjct 97 GAATTCCCTCTTTATCCTG 79
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| ||||| | | ||||| || ||||||||||| || |||||||||||||
Sbjct 445 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTG 386
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | || | | ||| || | |||||||| |||||||| | || || || || ||||
Sbjct 385 ACAATGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAG 326
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| |||||||| |||||
Sbjct 325 GAATGCCTTCTTTGTCTTG 307
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | | ||||| || ||||| ||||| || ||||| || || |
Sbjct 673 TTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAG 614
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| || | || |||||||||||||| | |||||||||||| || |
Sbjct 613 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 554
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| || |||||||| ||
Sbjct 553 GAATACCCTCTTTATCCTG 535
>seq100037
Length=1801
Score = 86.0 bits (94), Expect = 9e-12
Identities = 96/127 (76%), Gaps = 6/127 (5%)
Strand=Plus/Minus
Query 27418 GTAGATTCTCATAATATTATACCAGTATGGGTAACTTCAGATAAACAGGAATATAACGCA 27477
|||||| |||| ||| | | ||| ||||| |||| ||||||||||||||| |||
Sbjct 274 GTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCAGCA 215
Query 27478 AGAACAATAAGGATTAAAATAAA---TAAATTAAAAGATCAATATTTAATCGAATTTCCT 27534
||||||||||| | |||||| || |||||| |||| ||||| | | |||||||||
Sbjct 214 AGAACAATAAGAAATAAAATCAATTCTAAATT---AGATGAATATCTTACAGAATTTCCT 158
Query 27535 AAAGTTA 27541
|||||
Sbjct 157 CCAGTTA 151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740951168431360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |