Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq251386 206 6e-49 >seq251386 Length=398 Score = 206 bits (228), Expect = 6e-49 Identities = 222/302 (74%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 13531 GGCAGCCTTTTATTGTTA-GAAAGGAGATTAAATGCCAGTATTAGAAAATGCAAGACATG 13589 ||| || |||||| | | | |||||| | | || || ||||||||||||||||||| | Sbjct 301 GGCGGCTTTTTATGTTGATGGAAGGAGGCTCA-TGGCAATATTAGAAAATGCAAGACACG 243 Query 13590 AAAAATTTGTTCAATGCCTAATTTCTGGCATGAGCCAACGAAAAGCATACAGAGAAGCAT 13649 |||||||||||||| |||||||| |||||||||| ||||| |||| || |||||||| | Sbjct 242 AAAAATTTGTTCAAAGCCTAATTGCTGGCATGAGTCAACGTCAAGCTTATAGAGAAGCTT 183 Query 13650 TTAAGCAATCATCAAAGTGGAAAGATTCAACTGTAGATGTAAAAGCAAGCGAACTTTTTG 13709 || || || || ||| ||| || |||||||| Sbjct 182 TTCNNNNNNNNNNNNNNNNNNNNGACAAGACGGTTGATAATCGAGCGAGTGAACTTTTCA 123 Query 13710 GTAAGGNNNNNNNNNNNNNTAAGGAACTCCAAGAAGAAGCTCAAGATGCTGCTATAATGA 13769 | ||| ||| ||||| |||||||||||||||||||| ||||| |||| Sbjct 122 GGGAGGTTTTGGGGAGGTATAAAGAACTTCAAGAAGAAGCTCAAGATGCCGCTATTATGA 63 Query 13770 CTCGTAAAGAGCGAATGGTCACTCTATCAGAGATAGCTAAAAATGCCGAAAAAGAAGCTG 13829 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 62 CTCGTAAAGAGCTAATGGTCACTCTATCAGAAATAGCTAAAAATGCCGAAAAAGAAACTG 3 Query 13830 AC 13831 || Sbjct 2 AC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120016598464134