Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq10526 242 3e-59 >seq10526 Length=5062 Score = 242 bits (268), Expect = 3e-59 Identities = 739/1129 (65%), Gaps = 31/1129 (3%) Strand=Plus/Plus Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932 || ||||||| |||||||| ||||| |||| || ||| || || ||| ||||| Sbjct 3153 TTCGCAATCTCCCTGTAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTA 3212 Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992 || ||| |||| ||| ||| | ||| | || ||||| ||||| || || || Sbjct 3213 GCGTTGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAGCCACGACCA 3272 Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052 ||||| || || || | || | || || |||||||||| ||||| ||||| | Sbjct 3273 TACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTT 3332 Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112 || | | || | ||||| | ||| || || |||||||| | |||||| || ||| Sbjct 3333 ACTCCAAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTT 3392 Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172 ||||| || ||| ||| ||||| ||||| ||||| || |||||||||| |||||| Sbjct 3393 TGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATA 3452 Query 36173 TTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCG 36232 | ||| | ||| | ||| || | || | ||| | ||| || || |||||| Sbjct 3453 TGATCCATATAATTTTGAGCCTTACCATAGTCAACAACTTGGATTTTATCCCATCCAGCG 3512 Query 36233 CTAATCGCTGTGGTGAGTTCTAAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAGC 36289 ||||| || | || | ||| | | || |||| || | | || || ||||||| Sbjct 3513 CTAATAGCAGAAGTTAATTCGTATTTCTTACCATTC-TTAGCAGA-GAGCTC-ATCGAGC 3569 Query 36290 ATGGCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCA 36349 || | || ||||| || ||| | ||| | | || ||| || Sbjct 3570 ATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCG 3626 Query 36350 ACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAA 36409 | || || || || |||||||| || || || |||||||| ||||| | || ||||| Sbjct 3627 AGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAG 3686 Query 36410 AATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA 36469 ||||||||||| | | ||| || || || | ||||| ||| |||| | | Sbjct 3687 AATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTA 3740 Query 36470 ---TCGTGCATATGATAGAAG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAAC 36523 | || | | ||||| ||||||| || ||||| || || || || | || Sbjct 3741 GATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGG-AAG 3799 Query 36524 ACTTTTAGATTG-GGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTA 36582 | | || ||| || ||| |||| || ||||||||| ||||| ||||||||||| Sbjct 3800 AATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTA 3859 Query 36583 GGGTTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTG 36642 ||| |||||||||| | ||| ||||||||||||| | || ||||| |||||||| Sbjct 3860 GGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTG 3919 Query 36643 TATGGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCC 36702 || || ||||| || | || | ||| || |||| || | |||| ||||| || Sbjct 3920 GATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCC 3979 Query 36703 CGTGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTA 36762 ||| ||||||||| || || || ||||||||||||||||| || ||||| ||||| Sbjct 3980 TTCGATCTCTTTTAAACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTA 4039 Query 36763 TAAAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAAC 36822 | | || | ||| || || | || | |||||||| || | | || || Sbjct 4040 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGAC 4099 Query 36823 GCCCCATTCGACAAAATAGGCCGCTACGGTGTGATCAG-TGTTGTACGTATACGGTTTAT 36881 |||||||| || || ||||| | || | ||| |||| | | | |||| |||| Sbjct 4100 ACCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTT-TGCTTGAACGGCTTAT 4158 Query 36882 TGTTTTCTTGCCACGTGTATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCA 36941 | |||||| | | || |||| | || |||||| | |||||||| || || || Sbjct 4159 TTTTTTCTCCCAATGTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGC---CA 4215 Query 36942 CGACTTCTACGGTTTGACTAGCCGAA---CAGCCGTCGGCATTGCACAG 36987 |||| | |||| || | ||| |||||||| ||||||| || Sbjct 4216 CGACAATTTCGGTGGGATCACTTGAACTGCAGCCGTCTTCATTGCAAAG 4264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416891408699360