Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 601 3e-167
seq170880 161 9e-35
seq7533 147 2e-30
seq266287 118 9e-22
seq28654 113 4e-20
seq27511 102 7e-17
seq41046 98.7 9e-16
seq141872 95.1 1e-14
>seq13366
Length=6323
Score = 601 bits (666), Expect = 3e-167
Identities = 1217/1789 (68%), Gaps = 40/1789 (2%)
Strand=Plus/Plus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
||||| || |||||||| || || ||||| || ||||| ||||| | || ||||| ||
Sbjct 505 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 564
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224
|| || | ||||| ||||| |||| ||||| |||||||| | ||||||||| | ||
Sbjct 565 GTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGT 624
Query 22225 ----CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280
||| |||||| || || || ||||| || || ||||| ||||||| ||| |
Sbjct 625 TTAGCAA---CATGTATG--TTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAG 679
Query 22281 CGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
| ||||| | ||| |||| || || || ||||||||||| ||||||| | || |
Sbjct 680 CTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTA 739
Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400
| ||| || || ||| || || | || || || |||| ||| || | |||||
Sbjct 740 TTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTT 799
Query 22401 TAATCGTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACC 22459
| || || | ||||||| | | || |||||||| | | |||||| |||||||
Sbjct 800 TCATATCTTCATCCCACAAATC-AGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACT 858
Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519
|| |||| || || || ||||| | | ||||||||| || ||||| || ||||| |||
Sbjct 859 ACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAA 918
Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579
|||||| |||| || || || || || || || || |||||||| || || | || |||
Sbjct 919 GATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGA 978
Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAAT-TTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638
|| || | ||| || || |||| || ||| || || || | | ||||||||| || ||
Sbjct 979 GAATTGCGCAAACCATGTTTTGCTATCTTTTCT-TTAAGGACAGCCCAGTCCCAAAGGTC 1037
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698
| || || |||||||||||||| || || | | || | || || || || ||
Sbjct 1038 TGTAGGAGT---TTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 1094
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758
|| || || ||| | ||| | | | | || | ||| || || || || || || ||
Sbjct 1095 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACC 1154
Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG----GCGGCGACGCTTTCGT 22814
||||| || || || || || ||||| | | | | || | |||||||
Sbjct 1155 ATAATAAATTGTTTCAAATAT----TTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 1210
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| | || | ||||| ||| ||||| || ||||| |||||||| || ||||| || ||||
Sbjct 1211 AAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 1270
Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934
| | ||| ||| || ||||||||| || | |||||| |||| ||| || |
Sbjct 1271 TATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAATTAACATCAATAACTT 1330
Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994
|||| || ||| || ||||| || || || | ||| | ||||
Sbjct 1331 TGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAAT--TAAATCT 1388
Query 22995 CCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGT 23054
||| | |||||||| |||| | || || || ||||| ||||| || ||||| || |
Sbjct 1389 GTTATT-TTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT 1447
Query 23055 CTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAAT 23114
||| || ||||| | |||| || || || ||||||||||| || || ||||| | ||
Sbjct 1448 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 1507
Query 23115 TGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCT 23174
| | || || || |||| || || | |||||| || | |||||| || || || ||||
Sbjct 1508 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 1567
Query 23175 CGACCTGCGACTCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGCACGTAC 23233
| || || | || || || | ||| | | || ||||| || || | |
Sbjct 1568 CCACTTGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAAT 1626
Query 23234 CTGCCTTCTTCCTCGTACTTTTGG--TACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291
| |||||| || || ||||| || | | |||||||| | || | ||||| |
Sbjct 1627 CGTTTTTCTTCTTCATA--TTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAG 1684
Query 23292 CCAGGCCGGGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350
| ||||| || | | ||| ||||||||||||||||| | | || ||||| || | |
Sbjct 1685 CGAGGCCAGGACAAT-CATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 1743
Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410
||||||| ||||| |||||||||| ||| || |||||||| | || | || || ||
Sbjct 1744 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 1803
Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470
|| || |||||||| || |||||||| || || || | ||||||||||| ||||| |
Sbjct 1804 TTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAA 1863
Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530
|||| ||||| ||||| || | || || || || ||||| || || | ||| || |||
Sbjct 1864 TAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 1923
Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590
|| |||||||| | ||| ||||| ||||| || || | || ||| || |
Sbjct 1924 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 1983
Query 23591 GAACCTTTTGCTC-GA-ACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648
||||| | |||| || | |||| | || ||||||||||| || | ||||| || |
Sbjct 1984 GAACCCTGAGCTCTGATGCAATGTGTA--TGTAAACCTATGCCACCAGCAGATTTAGAAA 2041
Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708
| | || |||||||| | ||| || | || || || ||||| || ||||| | || |
Sbjct 2042 TTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTA 2101
Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768
| |||||| || || | || | || || || || ||||||||||| ||||| |
Sbjct 2102 TAAGGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTG 2161
Query 23769 CGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCT 23828
| || ||||| ||| | ||||| | ||| || || | ||| || ||||||||| |
Sbjct 2162 CATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTT 2221
Query 23829 CTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
| || || || || |||| ||| | ||| | ||||| |||||| || ||
Sbjct 2222 CACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 2270
>seq170880
Length=1133
Score = 161 bits (178), Expect = 9e-35
Identities = 345/507 (68%), Gaps = 14/507 (3%)
Strand=Plus/Minus
Query 23456 TGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACG 23515
||||||||||| ||||| | ||| ||||| ||||| | ||| || || ||||| |||||
Sbjct 1076 TGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACCCTGGTCGACA 1017
Query 23516 TAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCT 23575
|| ||||| ||||||||| | || | ||||| ||||||| ||||| || ||| |
Sbjct 1016 TAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGAGTATCCGTTT 957
Query 23576 ACGCCCGCCACACTCGAACCTTTTG----CTCGAACGTTGTGAACGTGGAAACCTATGCC 23631
||| | | | | ||| | | || | |||||||| ||||| || || ||
Sbjct 956 GTGCCACCGAT----GTAGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGCCGATACC 901
Query 23632 TCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCT 23691
||| | | || || ||||| ||||| ||||| ||||||||||||||||||||
Sbjct 900 GCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTAGATGCCCTCGATCGA 841
Query 23692 GTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGA 23751
||| || || |||| || | ||| || || | | || | | |||||| | ||
Sbjct 840 GTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGCCAGCATT 781
Query 23752 GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTC-GACAT-TAGATTGTACGTGTCG 23809
||| || || || ||| || || ||||| | ||| ||||| ||| |||||||| |||
Sbjct 780 GAAGAGGGTGGGCGAGGCATGGGTGAAGTA-CTTTTCGGACATGTAG-TTGTACGTCTCG 723
Query 23810 ATGGC-GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTG 23868
|| || || | | || | ||||| || ||||| ||||||||||| | ||||| ||
Sbjct 722 ATCGCACGCGT-GACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATGTGCTG 664
Query 23869 AGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAA 23928
|| | |||| | | ||||| || || || || || || | | || || ||
Sbjct 663 CGGGCGCTCGGCGACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTCTTGAA 604
Query 23929 TCCAAAATAGTCATAGTTAAAGTCACG 23955
||||| || | || |||||||| ||
Sbjct 603 GCCAAAGTAATTGTAATTAAAGTCGCG 577
>seq7533
Length=2710
Score = 147 bits (162), Expect = 2e-30
Identities = 165/218 (76%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 57634 AGGATCTGAGC-GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692
|||| || ||| |||||||| | | ||||| | ||||| | ||||||| || || ||
Sbjct 806 AGGA-CTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCATGTC 864
Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752
|| || || || || || || |||||||||||||| ||||| ||||| || | ||||||
Sbjct 865 TTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTTCA 924
Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812
||||| || |||||||| || || || ||||| || || |||||| | || || |||||
Sbjct 925 CAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAAT 984
Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTA 57850
|| |||||||| ||||| || || | || || || ||
Sbjct 985 GTTCATTCAGAGATGTACTCTTTATTAATTGACACATA 1022
Score = 100 bits (110), Expect = 3e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGA 57568
|||||| || ||| || ||||| | | ||||| || || || || ||||||||||
Sbjct 555 TGAACCCCTGTTGAGGGAAAATCCTAGACGTTTTGTTATATTCCCAATCCAATATCCAGA 614
Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628
|| ||| | ||||| ||||| || ||||||||||||||||| | |||||||||||| |
Sbjct 615 TATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGGACTGCAGAAGAAGTAGACTT 674
Query 57629 GTCTAAGG 57636
|||||||
Sbjct 675 ATCTAAGG 682
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974
||||||||||| ||| | | | ||||| ||| || || || || | || |
Sbjct 1673 AAGAAGGCAGACTGGGCGTTACAGTGGATCGGCAGCAAGACAGCTACATTTGGAGAACGT 1732
Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034
|||| || || || || || || || ||||| || || ||||||||||| ||||||||
Sbjct 1733 ATAATTGCTTTTGCAGCAGTTGAGGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTT 1792
Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
||| |||| ||||| || ||||||||||| |||| || || || ||
Sbjct 1793 TGGTTGAAAAAACGAGGTCTGATGCCCGGATTGACTTTCAGTAATGA 1839
>seq266287
Length=596
Score = 118 bits (130), Expect = 9e-22
Identities = 306/458 (67%), Gaps = 19/458 (4%)
Strand=Plus/Plus
Query 22238 ACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAAT 22297
|| |||| |||||||||||| || || ||||| ||||| ||||| || | | |||
Sbjct 150 ACGTTGAGCGACTGACTCTGGTCAATGAACGCGCCTCGGTCGGCAGCAAGGT----CAA- 204
Query 22298 GTACG--CATC---GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTA 22352
| ||| | || || || ||||| ||||||||||| | | | || | | ||||
Sbjct 205 GAACGACCTTCTGAGAAATCTCCCAGACGGTCTTGTAGACGGCCTTCATGTGTGCGGGTA 264
Query 22353 TCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGT 22412
| | ||| |||||| || || | | | |||||| || || ||| ||| |
Sbjct 265 TACCGTTGATGTTCTGGATTGAGCCCTGGTGGGCAATGATCCGGTTCTTCATCTCATCAT 324
Query 22413 TCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACCACTTGAAACTC 22470
||| | ||| || | || |||| ||| ||| ||||||| | || |||||
Sbjct 325 CCCAGAGGCCGGCATCGACGAGCTCCTTGAGCAGCCATG--GGTTCACGATCTGGAACTC 382
Query 22471 GCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTT 22530
||||| |||||||||||| ||| |||||||| ||| |||| || || | || |||
Sbjct 383 GCCGGCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCGTTGAA 442
Query 22531 TCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCA- 22589
||| || ||||| ||| || |||||||| ||||||| || ||||| || | |
Sbjct 443 TCCAAGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCAGAAGGAGCGAATTGCGGAT 502
Query 22590 AGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCA 22649
| | || |||| || || ||| ||| ||||||||| || || ||||||||||
Sbjct 503 ACCTTTGGCCTGAACGCGCTCT-TTCAGCGTCGCCCAGTCCCAGAGGTCCGACGGCGTCA 561
Query 22650 CATTGTCCCACATATCGTATTGCAACACGCCGCGACTC 22687
| | ||||||| || || || | | | || || |||
Sbjct 562 C---GCCCCACATGTCATACTGAAGCTCACCTCGGCTC 596
>seq28654
Length=3315
Score = 113 bits (124), Expect = 4e-20
Identities = 156/217 (72%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245
|||||| ||||| || || || || || || || || ||||| || || | || |||||
Sbjct 2620 ATCAAA-ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGA 2562
Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305
||| ||||| | | | |||| || ||| | ||| |||||||||||| | || ||
Sbjct 2561 ACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCC 2502
Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365
|| || || ||| | || |||||||| || || ||||||||| ||| | ||
Sbjct 2501 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGA 2442
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
||||| |||||||||||||| |||||||| |||||
Sbjct 2441 CTATAATATTCAAAAAGAATCTACTCTTCACTTGGTA 2405
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||| || || || || ||||| | || || || || |||
Sbjct 790 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 731
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||||| || || | || |||||||| ||| | || || |||||
Sbjct 730 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 671
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| |||||||| || || ||| || || ||||||
Sbjct 670 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 611
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| ||||||||||| ||| | ||| | ||||||
Sbjct 610 ATCCAAAAAGAATCTACTTTGCATTTAGTACTT 578
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || |||||||| |||||||| ||||| ||||| | || |||||||| ||
Sbjct 1018 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 959
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | |||| || ||| | || ||||| || || | || || || ||
Sbjct 958 GACACTATTGAAAATGTTAAAGCTAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 899
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||||||||| ||| |||| || ||| | || |||||
Sbjct 898 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTATAAT 839
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
||||| ||||| || ||| | || |||||
Sbjct 838 ATTCAGAAAGAGTCCACTTTGCACTTGGTA 809
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || || || || || || || || || ||| | || || ||||| ||
Sbjct 1930 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 1871
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | |||| || ||| | ||| ||||| || ||| | || || || |||
Sbjct 1870 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 1811
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || || |||||||| | || | || || |||
Sbjct 1810 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 1751
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || |||||||| ||||| | ||| | || ||||
Sbjct 1750 ATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTA 1702
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || || || || || ||||| || || | || |||||| | ||
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || ||| | ||| ||||| |||||| | || || || ||
Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| || || ||||| | || || || || |||
Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 1979
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||||||||| ||| | || | |||||| | | || || ||||
Sbjct 1978 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 1930
>seq27511
Length=800
Score = 102 bits (112), Expect = 7e-17
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| |||||||| ||||| |||||||| ||||| | || || ||| | ||
Sbjct 217 ATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTCT 276
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | |||| || || || || || ||||| |||||| | || || |||||
Sbjct 277 GATACAATAGAAAATGTTAAGGCAAAG-ATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || || || |||||| ||||||| | | | || || |||||||
Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGA-TGGACGTACATTGTCAGATTATA 394
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| ||||| || ||||| ||| | || |||| || | || ||||| ||
Sbjct 395 ATATTCAGAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGG 443
Score = 82.4 bits (90), Expect = 7e-11
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| | ||
Sbjct 445 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCT 504
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || || ||| ||| || || || | || || || |||
Sbjct 505 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAG 564
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369
|| | || || || ||||| || ||| | ||||| | | | ||||| || ||
Sbjct 565 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTAT--CTGACTAC 621
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || ||||| ||| | || |||||||| | ||||| || ||
Sbjct 622 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGG 671
>seq41046
Length=7774
Score = 98.7 bits (108), Expect = 9e-16
Identities = 164/232 (71%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || || ||||| || ||| |||| || || | ||
Sbjct 7382 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCT 7323
Query 31253 GACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | | |||| || ||| || | ||| || |||||||| | || || ||||
Sbjct 7322 GATACTATAGAAAATGTTAAA-AGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACC 7264
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTAT 31369
|||| ||| | || || ||||| ||||| | ||||| | | | || || || ||
Sbjct 7263 AGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGA-TGGACGTACATTGTCTGACTAC 7205
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||||||| ||||| || | ||||| || ||| |||| | || ||||
Sbjct 7204 AACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTA 7153
>seq141872
Length=750
Score = 95.1 bits (104), Expect = 1e-14
Identities = 118/159 (74%), Gaps = 6/159 (4%)
Strand=Plus/Plus
Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379
|| ||||| || | ||||| || |||||||||||||| ||||| | || ||||| |||
Sbjct 595 CACTACAATACACAGAATCCATTCGATTTTATGAATCTCATCTCATTGGAAGGCAAAACA 654
Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439
|| || || || || |||||| | ||||| || || | || |||||| ||| |||
Sbjct 655 AATTTCTTTGAGAAGAAAGTTGGAGAATACCAGAAGTGGGGAGTGATG-GCG----CAAC 709
Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478
| |||| || |||||||||| ||||||| ||||||
Sbjct 710 CT-ATGGACAATGTTTTCACTTTAGATGCTGAATTTTAA 747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444222471357360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |