Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq67190 354 3e-93 seq211676 125 2e-24 seq156590 84.2 7e-12 >seq67190 Length=2338 Score = 354 bits (392), Expect = 3e-93 Identities = 724/1053 (69%), Gaps = 41/1053 (4%) Strand=Plus/Plus Query 33606 GGCTCGATGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCCC 33665 ||||||||||||||||| || || || ||| |||| || |||||||| ||||| Sbjct 1245 GGCTCGATGCCGGCCTCCGCGAGGCGCTCGGTGTACTTGATAGACACGTATTGCGACCCG 1304 Query 33666 CTGTCGGAATGATGAATCAAAGTCCCGTCCTCGCCCGGTTGGCGGGCGTACAGCGCTTGT 33725 | |||| || |||| ||| || | | | || |||| | | ||||| || Sbjct 1305 CGGTCGCTGTGGTGAACCAAGCCGCCACGGTGGACTGGCCTGCGGTCATGAAGCGCCTGC 1364 Query 33726 TCAAGTGCATCCAGAACAAAGTCCGTGGTCATC----GACGAGCTGACCCGCCAGCCAAC 33781 || ||||||||||| || ||| ||| ||| | | |||| | ||||| || || Sbjct 1365 TCGAGTGCATCCAGGACGAAGC---TGG-CATGTGCTGTCCTGCTGGCACGCCATCCGAC 1420 Query 33782 AATACGGCGGGCGAACACGTCGATCACGAATGCCACGTACAGCCAGCCTTGCCATGTCGA 33841 || ||||||||| | |||||| ||||| || ||||| | | || ||| || | Sbjct 1421 GATTCGGCGGGCGTAGGTGTCGATGACGAAGGCGACGTAGACGAACCCCGCCCAAGTTGC 1480 Query 33842 GACATACGTAAAATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTT-GAACTGCCGGT 33900 ||| || ||||| ||||||||||| ||| ||||| || | | | | ||||||||||| Sbjct 1481 GACGTAGGTAAAGTCCGACACCCACAGCATGTTCGG-CGCTGGGGCGTAGAACTGCCGGT 1539 Query 33901 TGACTCGGTCCAGCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGAACACGCTTAC 33960 |||| | || |||||| |||||| | |||| | || |||||||| || |||| | Sbjct 1540 TGACGTGATCGCGCGGGCACGGCGCCGCTTTATCGCTGATGGTCGTGCGCACCGGCTTGC 1599 Query 33961 CGCGAACTGCGCCACGCAAGCCCTGCAGCTTCATCAACCGTCCGACCGTGCAGCGTGCCA 34020 |||| | | | || ||||||| | ||||| |||| | || || ||||| || | Sbjct 1600 CGCGGATTACCCCCGCCAAGCCCATCTCGCGCATCAGCCGTTCCACGGTACAGCGCGCGA 1659 Query 34021 CCGTAATGCCTTCCCGGTTCATCTGCTTCCAGACCTTCGGCACGCCGTAGACCTGCATGT 34080 ||| || ||| ||||| |||||||| ||||||||| |||||||||||||| | || Sbjct 1660 CCGCAAAGCCCTCCCGCATCATCTGCCGCCAGACCTTGCGCACGCCGTAGACCGCGAAGT 1719 Query 34081 TGGCCTGCCAGACACGCTTGATCTCCGGTT---GCAAAAGCTCATCGCGTTTCGCGCGGG 34137 | || | || || |||||| | | | | || || || || ||| || | Sbjct 1720 TCTCCGCGAATACGCGAGCGATCTCGGTCTTGAGGATCAGATCCTCACG---CGCCCGTG 1776 Query 34138 CGCAGCGTTTCGACGGATCGCGAAGTTGTGCTGCATGG-CGTCGGTAGCCCGACGGGGCA 34196 | | | ||| ||||| | | || || | || ||| | ||| || ||||| Sbjct 1777 CCGACAGACGCGATGGATCCTGTCGCTGCGCGACGTGCTCGTAG-TAGGTGGATGGGGCG 1835 Query 34197 ATCCGCAAGACCTTGCAGATCGGCTCGACCCCGAAGGTGTCGCGATGCTGATCAATGAAG 34256 ||| ||| ||| |||||||||||||||||| ||| ||||| || | |||||||| Sbjct 1836 ATCGGCAGGACACGGCAGATCGGCTCGACCCCATAGGCATCGCGGTGATCGTCAATGAAA 1895 Query 34257 GCCTTCAGGACTTGAAACGGCGGTCGAGCTCCGCCTGAGCGAAAAACGCGCTCGCCAGTT 34316 || ||| | ||| ||||||||||||||||||| |||||| | || ||| | Sbjct 1896 GCGATCATCGCCGGAACGGGCGGTCGAGCTCCGCCTGCGCGAAATATGCCGATGCC---T 1952 Query 34317 TG---AGAATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGC 34373 || || || ||||||| | | |||||||| ||||||||| |||| || || | Sbjct 1953 TGCGCAGGATTTCGTTGGCCTGCCGCAGTTCGCGGACCTCGCGTTCCAGCGCCTTCACTT 2012 Query 34374 GTTCACGCT-CGGCCGTACTCACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTA 34432 ||| ||| | | || || || |||| | || | |||||| ||| ||| Sbjct 2013 TGTCA-GCTACCTCGGTCGGGACACCGCCGCGTTTGCCGCTGTCGACTTCGGCCTTCTTC 2071 Query 34433 ACCCAATCCAACAGCGTCTGCGGCGTGCAGCCGATC--ATCGGCGCAATCGATTCGACGG 34490 ||||| || |||||||||||| |||||||||| |||||| |||||| | |||| Sbjct 2072 ACCCACTCATGCAGCGTCTGCGGAACGCAGCCGATCTTTTCGGCG--ATCGATACCACGG 2129 Query 34491 CCGCCCACATCGACGGGTG--CTCGCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTC 34548 ||||||| | |||||||| | |||| || || ||| |||| ||||| || ||||| Sbjct 2130 TCGCCCACCTAGACGGGTGATCCCGCT-CG-TGATCGAAAACCATCCGCACCGCTCGCTC 2187 Query 34549 TCGGACTTCCGGGGAAAACTGCTTGG----CTT-CTGTTCATGGCTCCATTCTCTCA-GA 34602 || ||||| || | ||||| |||| ||| || ||||||||||| ||||| || Sbjct 2188 GCGTACTTCTGGCGCAAACTTGTTGGTCGTCTTGCTCGTCATGGCTCCACCTTCTCAGGA 2247 Query 34603 GTTGGAGCCTCC-ACAAACTCGGGGCGGTTCAG 34634 |||||||||||| |||||| ||||||||||||| Sbjct 2248 GTTGGAGCCTCCGACAAACCCGGGGCGGTTCAG 2280 >seq211676 Length=716 Score = 125 bits (138), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 33405 TCAGCTTCAGCGGGCGGGATATAG--CCGAGCGGTTCCATCAGCCGATGATGGTTGTACC 33462 || ||||| || |||||||| | | |||| || || | |||||| |||| ||| ||| Sbjct 1 TCGGCTTCGGCAGGCGGGATGTTGTGCCGATAGGCTCTAGCAGCCGGCGATGCTTGAACC 60 Query 33463 AGGCGACCCATTCCAGCGTTGCCAGTTCGACGGATTCCCTCGTTTTCCAAGGGGCGCGCC 33522 || |||||||||| || || || ||| || | ||| | | | ||| | || | Sbjct 61 AGTCGACCCATTCGAGGGTCGCGTATTCCACCGCTTCGAAAGATCGCGTAGGTCCACGGC 120 Query 33523 GATGAATCAGTTCCGTCTTGTACAGGCCGTTGATCGTTTCGGCCAGCGCATTGTCGTAGC 33582 ||| || | | | |||||| |||||||||||||| ||||||| || ||||| |||| Sbjct 121 AATGGATGACCTAGGCCTTGTAGAGGCCGTTGATCGTCTCGGCCAAAGCGTTGTCATAGC 180 Query 33583 TGTCGCCCCGGCTGCCGACTGAGGGCTCGATGCCGGCCTCAGCCAGCCGTTCGCTGTA 33640 ||||||| |||||| || |||||| |||| ||||| || |||| || || |||| Sbjct 181 TGTCGCCGACGCTGCCAACCGAGGGCCCGATCCCGGCGTCGGCCAAGCGCTCAATGTA 238 >seq156590 Length=1116 Score = 84.2 bits (92), Expect = 7e-12 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 44385 CCCGAGGCGCTCGTCGAACCTTGCGTGCTCGCCGGCAGTCGGCCGGGCGACGTCGTGTTC 44444 ||||||||||| || | | | |||||||| ||| || |||||||| ||| || Sbjct 549 CCCGAGGCGCTGCTCTACCGCATCCTGCTCGCCTGCACCGAACCCGGCGACGTGGTGCTC 490 Query 44445 GATCCGTTCTTCGGCAGCGGCACGACCGGACAAGTAGCGCAGCGCCTCGGCCGCCGTTTC 44504 || ||||||||||||| ||||||||| || || ||| |||| ||||||||| | | Sbjct 489 GACCCGTTCTTCGGCACCGGCACGACGGGTGCGGTGGCGAAGCGGCTCGGCCGCAGCTGG 430 Query 44505 ATCGGC 44510 |||||| Sbjct 429 ATCGGC 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170110427571410