Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_003309.1
Length=53373
Score E
Sequences producing significant alignments: (Bits) Value
seq67190 354 3e-93
seq211676 125 2e-24
seq156590 84.2 7e-12
>seq67190
Length=2338
Score = 354 bits (392), Expect = 3e-93
Identities = 724/1053 (69%), Gaps = 41/1053 (4%)
Strand=Plus/Plus
Query 33606 GGCTCGATGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCCC 33665
||||||||||||||||| || || || ||| |||| || |||||||| |||||
Sbjct 1245 GGCTCGATGCCGGCCTCCGCGAGGCGCTCGGTGTACTTGATAGACACGTATTGCGACCCG 1304
Query 33666 CTGTCGGAATGATGAATCAAAGTCCCGTCCTCGCCCGGTTGGCGGGCGTACAGCGCTTGT 33725
| |||| || |||| ||| || | | | || |||| | | ||||| ||
Sbjct 1305 CGGTCGCTGTGGTGAACCAAGCCGCCACGGTGGACTGGCCTGCGGTCATGAAGCGCCTGC 1364
Query 33726 TCAAGTGCATCCAGAACAAAGTCCGTGGTCATC----GACGAGCTGACCCGCCAGCCAAC 33781
|| ||||||||||| || ||| ||| ||| | | |||| | ||||| || ||
Sbjct 1365 TCGAGTGCATCCAGGACGAAGC---TGG-CATGTGCTGTCCTGCTGGCACGCCATCCGAC 1420
Query 33782 AATACGGCGGGCGAACACGTCGATCACGAATGCCACGTACAGCCAGCCTTGCCATGTCGA 33841
|| ||||||||| | |||||| ||||| || ||||| | | || ||| || |
Sbjct 1421 GATTCGGCGGGCGTAGGTGTCGATGACGAAGGCGACGTAGACGAACCCCGCCCAAGTTGC 1480
Query 33842 GACATACGTAAAATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTT-GAACTGCCGGT 33900
||| || ||||| ||||||||||| ||| ||||| || | | | | |||||||||||
Sbjct 1481 GACGTAGGTAAAGTCCGACACCCACAGCATGTTCGG-CGCTGGGGCGTAGAACTGCCGGT 1539
Query 33901 TGACTCGGTCCAGCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGAACACGCTTAC 33960
|||| | || |||||| |||||| | |||| | || |||||||| || |||| |
Sbjct 1540 TGACGTGATCGCGCGGGCACGGCGCCGCTTTATCGCTGATGGTCGTGCGCACCGGCTTGC 1599
Query 33961 CGCGAACTGCGCCACGCAAGCCCTGCAGCTTCATCAACCGTCCGACCGTGCAGCGTGCCA 34020
|||| | | | || ||||||| | ||||| |||| | || || ||||| || |
Sbjct 1600 CGCGGATTACCCCCGCCAAGCCCATCTCGCGCATCAGCCGTTCCACGGTACAGCGCGCGA 1659
Query 34021 CCGTAATGCCTTCCCGGTTCATCTGCTTCCAGACCTTCGGCACGCCGTAGACCTGCATGT 34080
||| || ||| ||||| |||||||| ||||||||| |||||||||||||| | ||
Sbjct 1660 CCGCAAAGCCCTCCCGCATCATCTGCCGCCAGACCTTGCGCACGCCGTAGACCGCGAAGT 1719
Query 34081 TGGCCTGCCAGACACGCTTGATCTCCGGTT---GCAAAAGCTCATCGCGTTTCGCGCGGG 34137
| || | || || |||||| | | | | || || || || ||| || |
Sbjct 1720 TCTCCGCGAATACGCGAGCGATCTCGGTCTTGAGGATCAGATCCTCACG---CGCCCGTG 1776
Query 34138 CGCAGCGTTTCGACGGATCGCGAAGTTGTGCTGCATGG-CGTCGGTAGCCCGACGGGGCA 34196
| | | ||| ||||| | | || || | || ||| | ||| || |||||
Sbjct 1777 CCGACAGACGCGATGGATCCTGTCGCTGCGCGACGTGCTCGTAG-TAGGTGGATGGGGCG 1835
Query 34197 ATCCGCAAGACCTTGCAGATCGGCTCGACCCCGAAGGTGTCGCGATGCTGATCAATGAAG 34256
||| ||| ||| |||||||||||||||||| ||| ||||| || | ||||||||
Sbjct 1836 ATCGGCAGGACACGGCAGATCGGCTCGACCCCATAGGCATCGCGGTGATCGTCAATGAAA 1895
Query 34257 GCCTTCAGGACTTGAAACGGCGGTCGAGCTCCGCCTGAGCGAAAAACGCGCTCGCCAGTT 34316
|| ||| | ||| ||||||||||||||||||| |||||| | || ||| |
Sbjct 1896 GCGATCATCGCCGGAACGGGCGGTCGAGCTCCGCCTGCGCGAAATATGCCGATGCC---T 1952
Query 34317 TG---AGAATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGC 34373
|| || || ||||||| | | |||||||| ||||||||| |||| || || |
Sbjct 1953 TGCGCAGGATTTCGTTGGCCTGCCGCAGTTCGCGGACCTCGCGTTCCAGCGCCTTCACTT 2012
Query 34374 GTTCACGCT-CGGCCGTACTCACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTA 34432
||| ||| | | || || || |||| | || | |||||| ||| |||
Sbjct 2013 TGTCA-GCTACCTCGGTCGGGACACCGCCGCGTTTGCCGCTGTCGACTTCGGCCTTCTTC 2071
Query 34433 ACCCAATCCAACAGCGTCTGCGGCGTGCAGCCGATC--ATCGGCGCAATCGATTCGACGG 34490
||||| || |||||||||||| |||||||||| |||||| |||||| | ||||
Sbjct 2072 ACCCACTCATGCAGCGTCTGCGGAACGCAGCCGATCTTTTCGGCG--ATCGATACCACGG 2129
Query 34491 CCGCCCACATCGACGGGTG--CTCGCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTC 34548
||||||| | |||||||| | |||| || || ||| |||| ||||| || |||||
Sbjct 2130 TCGCCCACCTAGACGGGTGATCCCGCT-CG-TGATCGAAAACCATCCGCACCGCTCGCTC 2187
Query 34549 TCGGACTTCCGGGGAAAACTGCTTGG----CTT-CTGTTCATGGCTCCATTCTCTCA-GA 34602
|| ||||| || | ||||| |||| ||| || ||||||||||| ||||| ||
Sbjct 2188 GCGTACTTCTGGCGCAAACTTGTTGGTCGTCTTGCTCGTCATGGCTCCACCTTCTCAGGA 2247
Query 34603 GTTGGAGCCTCC-ACAAACTCGGGGCGGTTCAG 34634
|||||||||||| |||||| |||||||||||||
Sbjct 2248 GTTGGAGCCTCCGACAAACCCGGGGCGGTTCAG 2280
>seq211676
Length=716
Score = 125 bits (138), Expect = 2e-24
Identities = 171/238 (72%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 33405 TCAGCTTCAGCGGGCGGGATATAG--CCGAGCGGTTCCATCAGCCGATGATGGTTGTACC 33462
|| ||||| || |||||||| | | |||| || || | |||||| |||| ||| |||
Sbjct 1 TCGGCTTCGGCAGGCGGGATGTTGTGCCGATAGGCTCTAGCAGCCGGCGATGCTTGAACC 60
Query 33463 AGGCGACCCATTCCAGCGTTGCCAGTTCGACGGATTCCCTCGTTTTCCAAGGGGCGCGCC 33522
|| |||||||||| || || || ||| || | ||| | | | ||| | || |
Sbjct 61 AGTCGACCCATTCGAGGGTCGCGTATTCCACCGCTTCGAAAGATCGCGTAGGTCCACGGC 120
Query 33523 GATGAATCAGTTCCGTCTTGTACAGGCCGTTGATCGTTTCGGCCAGCGCATTGTCGTAGC 33582
||| || | | | |||||| |||||||||||||| ||||||| || ||||| ||||
Sbjct 121 AATGGATGACCTAGGCCTTGTAGAGGCCGTTGATCGTCTCGGCCAAAGCGTTGTCATAGC 180
Query 33583 TGTCGCCCCGGCTGCCGACTGAGGGCTCGATGCCGGCCTCAGCCAGCCGTTCGCTGTA 33640
||||||| |||||| || |||||| |||| ||||| || |||| || || ||||
Sbjct 181 TGTCGCCGACGCTGCCAACCGAGGGCCCGATCCCGGCGTCGGCCAAGCGCTCAATGTA 238
>seq156590
Length=1116
Score = 84.2 bits (92), Expect = 7e-12
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 44385 CCCGAGGCGCTCGTCGAACCTTGCGTGCTCGCCGGCAGTCGGCCGGGCGACGTCGTGTTC 44444
||||||||||| || | | | |||||||| ||| || |||||||| ||| ||
Sbjct 549 CCCGAGGCGCTGCTCTACCGCATCCTGCTCGCCTGCACCGAACCCGGCGACGTGGTGCTC 490
Query 44445 GATCCGTTCTTCGGCAGCGGCACGACCGGACAAGTAGCGCAGCGCCTCGGCCGCCGTTTC 44504
|| ||||||||||||| ||||||||| || || ||| |||| ||||||||| | |
Sbjct 489 GACCCGTTCTTCGGCACCGGCACGACGGGTGCGGTGGCGAAGCGGCTCGGCCGCAGCTGG 430
Query 44505 ATCGGC 44510
||||||
Sbjct 429 ATCGGC 424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170110427571410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |