Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_003387.1 Length=52797 Score E Sequences producing significant alignments: (Bits) Value seq197020 80.6 9e-11 >seq197020 Length=1949 Score = 80.6 bits (88), Expect = 9e-11 Identities = 93/124 (75%), Gaps = 6/124 (5%) Strand=Plus/Minus Query 1058 ACGGCAAAGAGGCCGTGCTGTTTAAGAACGGCTCGCGCATCCTGTTCGGTGC---CCGCG 1114 |||||||||||| | | ||| | ||||||| ||||||| |||| |||| | ||| Sbjct 1557 ACGGCAAAGAGGGCATCGAGTTGATGAACGGCAACCGCATCCGGTTCCGTGCGCGCGGCG 1498 Query 1115 AGCGCGGGTTCGGCCGTGGGTTCGCCGGTGTCGACGTCCTGATTTTCGACGAGGCGCAGA 1174 | ||||| |||||| |||||| ||||| ||| || | || |||||||||||| || Sbjct 1497 AACGCGGCGGCGGCCGAGGGTTCTCCGGT---GACCTCGTCATCTTCGACGAGGCGATGA 1441 Query 1175 TCCT 1178 |||| Sbjct 1440 TCCT 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168273292364114