Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq61277 105 6e-18 >seq61277 Length=456 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20936 GTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCC 20995 ||||||| ||| | ||| || || |||| |||||| | ||||| ||||| ||| || Sbjct 429 GTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCGGTTGCAGACC 370 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 || || |||| ||| | | ||| ||||||||| |||||||| ||||| ||||| Sbjct 369 GACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGAACGGCACCCC 310 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTA 21115 |||| | ||| || || | |||||||||||||| || |||| || || ||||| Sbjct 309 GAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGTCGGCGACGTA 250 Query 21116 AAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||| ||| ||| || || || || ||||| Sbjct 249 GAACTGGAACAGCGAGTGGCACGGCGGTAGCGCCAT 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426331422237840