Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq7533 143 3e-29
>seq7533
Length=2710
Score = 143 bits (158), Expect = 3e-29
Identities = 168/225 (75%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
||||||| ||| ||||||||| || ||||| || ||||| ||||||| ||||||||
Sbjct 1859 CCTCATCCCTAGAAATAAGTTCATTACTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 1802
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||| ||||||||||||| |||||| || || || ||||||||||||||||| |||||
Sbjct 1801 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAA 1742
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| |||| ||||||||||| | ||| | ||| | ||||| | | ||||| ||
Sbjct 1741 AGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 1682
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || || |||| | | | |||||||| ||||| |||||
Sbjct 1681 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1637
Score = 104 bits (114), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201
|| ||||| ||||| | ||| ||||| || || || | ||||||||||| || |||
Sbjct 1025 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 966
Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261
|||||||| ||||| || ||||| | | ||| || || |||| | || ||||
Sbjct 965 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAG 906
Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321
|| |||||||| ||||||||| ||| ||||| ||||| || | | || ||||| | |
Sbjct 905 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGT 846
Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361
| ||| || || | | | | |||||| | ||| ||||
Sbjct 845 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478066444082200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |