Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq251386 228 2e-55 >seq251386 Length=398 Score = 228 bits (252), Expect = 2e-55 Identities = 228/303 (75%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 17027 GGCAGCCTTTTATTGTTG--GAAAGGAGATTAAATGCCAGTATTAGAAAATGCAAGACAC 17084 ||| || |||||| |||| | |||||| | | || || |||||||||||||||||||| Sbjct 301 GGCGGCTTTTTAT-GTTGATGGAAGGAGGCTCA-TGGCAATATTAGAAAATGCAAGACAC 244 Query 17085 GAAAAATTTGTTCAATGCCTAATTTCTGGCATGAGCCAACGAAAAGCATACAGAGAAGCA 17144 ||||||||||||||| |||||||| |||||||||| ||||| |||| || |||||||| Sbjct 243 GAAAAATTTGTTCAAAGCCTAATTGCTGGCATGAGTCAACGTCAAGCTTATAGAGAAGCT 184 Query 17145 TTTAAGCAATCATCAAAGTGGAAAGATTCAACTGTAGATGTAAAAGCAAGCGAACTTTTT 17204 ||| || || || ||| ||| || |||||||| Sbjct 183 TTTCNNNNNNNNNNNNNNNNNNNNGACAAGACGGTTGATAATCGAGCGAGTGAACTTTTC 124 Query 17205 GGTAAGGNNNNNNNNNNNNATAAAGAACTTCAAGAAGAAGCTCAAGATGCTGCGATTATG 17264 | ||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 123 AGGGAGGTTTTGGGGAGGTATAAAGAACTTCAAGAAGAAGCTCAAGATGCCGCTATTATG 64 Query 17265 ACTCGTAAAGAGCGAATGGTCACTCTATCAGAGATAGCTAAAAATGCCGAAAAAGAAGCT 17324 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| || Sbjct 63 ACTCGTAAAGAGCTAATGGTCACTCTATCAGAAATAGCTAAAAATGCCGAAAAAGAAACT 4 Query 17325 GAC 17327 ||| Sbjct 3 GAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117244948298960