Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq93232 113 7e-20
seq200937 107 3e-18
seq259364 95.1 2e-14
>seq93232
Length=5940
Score = 113 bits (124), Expect = 7e-20
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 70192 CAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAAT 70251
|||||||| || || ||||| | | ||| |||||||||| ||||||| | ||||
Sbjct 4327 CAATCCAAGTGACAGAAGGATGTTGGTATGCGCATGGAATCCCTCAGATTTAAGCAAAAT 4268
Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTA-CGA-TGGCAAATTGTCA 70309
|||||| || || ||||||||||| | |||||| | ||| | | ||| || | ||
Sbjct 4267 GGCACTTCCTCCATGTCACTGTTTAGTACAGTTT--CATGTATCTAGTGGAAAGCTTTCT 4210
Query 70310 TGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGC 70369
|| | ||||| || || || || || ||||| || ||| | || || ||||| || ||
Sbjct 4209 TGTATGATGTACCAAAGAAGCGCAGATATGGGTCTTGGTATTCCTTTCAACATGGCTAGT 4150
Query 70370 TATTCTATGTTGACGCACATGATTGCTCACATTAC 70404
||| || | ||||| || ||||||||||| || ||
Sbjct 4149 TATGCTCTATTGACACATATGATTGCTCATATAAC 4115
>seq200937
Length=824
Score = 107 bits (118), Expect = 3e-18
Identities = 274/414 (66%), Gaps = 15/414 (4%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| |||| ||| || || || |||| ||||| ||| |||| || || |
Sbjct 438 TGTTTCCAATCAAGTACCACGAAATCTGGGCCGCATACAAGCGTGCTGAGGCGTCGTTCT 379
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||||| ||| ||| | || ||||| ||||| || |||| ||||| | ||| ||
Sbjct 378 GGACGGCCGAGGAGATGGACCTGTCGAAGGATATGCACGACTGGGACAACAAGCTGAATG 319
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||||| | || || |||| | | |||||||||||| ||| ||||| ||||
Sbjct 318 ACGACGAGCGCTACTTCATCAAGCACGTCCTTGCCTTCTTTGCCACCTCGGATGGCATCG 259
Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235
||||||| || ||| | || ||||| | ||| | ||| || | |
Sbjct 258 TCAACGAGAACCTGCTCGAGCGCTTCTCGAACGAG--GTCCAGGCC--------CCCGAA 209
Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295
| ||||| ||||| |||||||| |||||| | || || || | ||||| || || |
Sbjct 208 TCTACGGGTTCCAGATCATGATGGAGAACATCCATTCCGAGGTCTACTCGCTCCTCATCG 149
Query 125296 ACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354
||| ||||| ||||| || || | ||| || || | | || |||||| |
Sbjct 148 ACACTTACATCCGCGACTCGACAGAGCGCCAGCAT-CTGTTCGAGGGTATTGACACGATC 90
Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGAC 125405
|| | || || |||||||| | |||| | | |||||||| |||||||||
Sbjct 89 CCCTGCATCCGCAAAAAGGCAGAGTGGGCGCTCCGGTGGATTTCAGATGACGAC 36
>seq259364
Length=501
Score = 95.1 bits (104), Expect = 2e-14
Identities = 140/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 125661 GAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTA 125720
||| ||||||| || ||| | || ||||||| |||| ||||||||| | | ||
Sbjct 495 GAAAAAGAGTTCCTTTGCGATGCACTCCCGGTCAAGCTGATCGGCATGAACGCCGACCTT 436
Query 125721 ATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT-GTACGAGTTGATTGGCCGCAA 125779
|||||| ||||||| ||||| || || || || || || || || | | ||| ||
Sbjct 435 ATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTTGTTGCCGTCGGTAACCCG-AA 377
Query 125780 GATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839
| |||||||| |||| || || ||||||||| | || || || | || |||||
Sbjct 376 GCACTACAACGCTCAGAACCCGTTCGATTTCATGGAGATGATCTCCCTCGCCGGAAAGAC 317
Query 125840 CAACTTTTTCGAGAAG 125855
||||||||||||||||
Sbjct 316 CAACTTTTTCGAGAAG 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738492513671080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |