Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq93232 113 7e-20 seq200937 107 3e-18 seq259364 95.1 2e-14 >seq93232 Length=5940 Score = 113 bits (124), Expect = 7e-20 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 70192 CAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAAT 70251 |||||||| || || ||||| | | ||| |||||||||| ||||||| | |||| Sbjct 4327 CAATCCAAGTGACAGAAGGATGTTGGTATGCGCATGGAATCCCTCAGATTTAAGCAAAAT 4268 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTA-CGA-TGGCAAATTGTCA 70309 |||||| || || ||||||||||| | |||||| | ||| | | ||| || | || Sbjct 4267 GGCACTTCCTCCATGTCACTGTTTAGTACAGTTT--CATGTATCTAGTGGAAAGCTTTCT 4210 Query 70310 TGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGC 70369 || | ||||| || || || || || ||||| || ||| | || || ||||| || || Sbjct 4209 TGTATGATGTACCAAAGAAGCGCAGATATGGGTCTTGGTATTCCTTTCAACATGGCTAGT 4150 Query 70370 TATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 ||| || | ||||| || ||||||||||| || || Sbjct 4149 TATGCTCTATTGACACATATGATTGCTCATATAAC 4115 >seq200937 Length=824 Score = 107 bits (118), Expect = 3e-18 Identities = 274/414 (66%), Gaps = 15/414 (4%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| |||| ||| || || || |||| ||||| ||| |||| || || | Sbjct 438 TGTTTCCAATCAAGTACCACGAAATCTGGGCCGCATACAAGCGTGCTGAGGCGTCGTTCT 379 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||||| ||| ||| | || ||||| ||||| || |||| ||||| | ||| || Sbjct 378 GGACGGCCGAGGAGATGGACCTGTCGAAGGATATGCACGACTGGGACAACAAGCTGAATG 319 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | ||||| | || || |||| | | |||||||||||| ||| ||||| |||| Sbjct 318 ACGACGAGCGCTACTTCATCAAGCACGTCCTTGCCTTCTTTGCCACCTCGGATGGCATCG 259 Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235 ||||||| || ||| | || ||||| | ||| | ||| || | | Sbjct 258 TCAACGAGAACCTGCTCGAGCGCTTCTCGAACGAG--GTCCAGGCC--------CCCGAA 209 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | ||||| ||||| |||||||| |||||| | || || || | ||||| || || | Sbjct 208 TCTACGGGTTCCAGATCATGATGGAGAACATCCATTCCGAGGTCTACTCGCTCCTCATCG 149 Query 125296 ACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354 ||| ||||| ||||| || || | ||| || || | | || |||||| | Sbjct 148 ACACTTACATCCGCGACTCGACAGAGCGCCAGCAT-CTGTTCGAGGGTATTGACACGATC 90 Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGAC 125405 || | || || |||||||| | |||| | | |||||||| ||||||||| Sbjct 89 CCCTGCATCCGCAAAAAGGCAGAGTGGGCGCTCCGGTGGATTTCAGATGACGAC 36 >seq259364 Length=501 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 125661 GAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTA 125720 ||| ||||||| || ||| | || ||||||| |||| ||||||||| | | || Sbjct 495 GAAAAAGAGTTCCTTTGCGATGCACTCCCGGTCAAGCTGATCGGCATGAACGCCGACCTT 436 Query 125721 ATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT-GTACGAGTTGATTGGCCGCAA 125779 |||||| ||||||| ||||| || || || || || || || || | | ||| || Sbjct 435 ATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTTGTTGCCGTCGGTAACCCG-AA 377 Query 125780 GATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 | |||||||| |||| || || ||||||||| | || || || | || ||||| Sbjct 376 GCACTACAACGCTCAGAACCCGTTCGATTTCATGGAGATGATCTCCCTCGCCGGAAAGAC 317 Query 125840 CAACTTTTTCGAGAAG 125855 |||||||||||||||| Sbjct 316 CAACTTTTTCGAGAAG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738492513671080