Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_004680.1
Length=59471
Score E
Sequences producing significant alignments: (Bits) Value
seq157980 143 1e-29
seq125305 95.1 5e-15
seq189415 86.0 2e-12
>seq157980
Length=2738
Score = 143 bits (158), Expect = 1e-29
Identities = 125/153 (82%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 54030 ATGACCATCTACTGCTACGACACAGAGTTCCTCGAAGACGGCAACACCATCGAGTTGATC 54089
|||||| ||||| ||||||||| |||||||||||||||||||| ||| |||| |||||
Sbjct 708 ATGACCGCCTACTTCTACGACACCGAGTTCCTCGAAGACGGCAAGACCGTCGACCTGATC 649
Query 54090 TCGATCGGCATCGTCTGCGAGGACGGCCGCGAGTACTACGCCGTCAACAGTGAC-ATGCC 54148
||||||||||||||| ||| || |||||||||||||||||| ||||| ||| || |
Sbjct 648 TCGATCGGCATCGTCGCCGAAGATGGCCGCGAGTACTACGCCATCAACTCCGACGCTGAC 589
Query 54149 GGAAGACCGAATCCACAAGGACTACTGGCTGAT 54181
| ||||| |||| || ||| ||||||| ||
Sbjct 588 TG-GGACCGCATCCGGAAAGACGACTGGCTCAT 557
Score = 86.0 bits (94), Expect = 2e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 54359 CCCGGAACTGTGGGCGTACTACGCCGCCTATGACCACGTTGCTCTGGCGCAATTGTGGGG 54418
||| ||||||||||| |||||||||| || |||||||| || || || || ||| ||
Sbjct 401 CCCCGAACTGTGGGCCGACTACGCCGCGTACGACCACGTCGCCCTCGCCCAGCTGTTCGG 342
Query 54419 GAAGATGATCCACTTGCCGACCGGGATCCCGATGTGGACCCACGA 54463
||||||||| | |||| ||||| ||||| |||| ||| ||||
Sbjct 341 CAAGATGATCAAACTGCCCACCGGCATCCCCATGTACACCAACGA 297
>seq125305
Length=4407
Score = 95.1 bits (104), Expect = 5e-15
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 54038 CTACTGCTACGACACAGAGTTCCTCGAAGACGGCAACACCATCGAGTTGATCTCGATCGG 54097
|| || ||||||||| |||||| |||| ||||| |||||||| || ||||||||||
Sbjct 1999 CTTCTTCTACGACACCGAGTTCATCGAGGACGGGCGGACCATCGATCTGGTCTCGATCGG 2058
Query 54098 CATCGTCTGCGAGGACGGCCGCGAGTACTACGCCGTC 54134
| ||||| ||||||||| || |||| ||||||||||
Sbjct 2059 CGTCGTCGCCGAGGACGGTCGGGAGTTCTACGCCGTC 2095
>seq189415
Length=2896
Score = 86.0 bits (94), Expect = 2e-12
Identities = 133/189 (70%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 42905 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 42964
||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| |||||
Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511
Query 42965 AGGAAACGCGAAACCC---GCAAAGCGGATCTGCGGTATTTGCGACGTCCGGGACGAATG 43021
|| | ||| | | || ||||| |||||| ||||| || || || ||
Sbjct 510 CGG---CTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTG 454
Query 43022 CCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCG 43081
||| ||| |||||| |||| |||| | |||||| |||| ||||| || ||||||||
Sbjct 453 CCTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCG 394
Query 43082 TGAACGCCG 43090
|| || ||
Sbjct 393 GGAGCGTCG 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189559820790318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |