Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_004683.1
Length=57050
Score E
Sequences producing significant alignments: (Bits) Value
seq219746 215 2e-51
>seq219746
Length=1062
Score = 215 bits (238), Expect = 2e-51
Identities = 429/642 (67%), Gaps = 31/642 (5%)
Strand=Plus/Plus
Query 45990 CCCGGAGTGCACGAATCACTCGGTGGCCAAGGGCCGCAAACGCGTCGACTCGCAGCCCGA 46049
|||| |||||| |||||||||| ||| ||||| ||| |||| |||| || |||||
Sbjct 18 CCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGA 77
Query 46050 TCTGTTCGGCGAGGTGCTGCCCGACGCGGCGGCCGAGCGGTCCCGCGCCACGATGTGGGA 46109
| ||| |||||| ||||||||| || ||||| || || || || |||||||||||
Sbjct 78 CCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGA 137
Query 46110 CGTGCCCCGGTTCGCCGAGGCGCACCGCTACCAGGCCGTCATCGTCGAGAACGTCGTGGA 46169
||| ||||||||||||| |||| |||| | || ||||||| ||||| || ||
Sbjct 138 CGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGA 197
Query 46170 CGCGTGGCACTGGCAGCCGTTCCAGGCGTGGCTGATGGCCATGGACTCGCTGGACTACGA 46229
|| || ||||| | |||| | ||||||| || | |||| | |||| |||| |
Sbjct 198 CGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTACAA 257
Query 46230 GCACCACATCGTGTTCCTGAACTCGATGCACGCGCAGGCGTTCGGTCCGGGGGCGCCGCA 46289
||| | ||||||| || |||||||||||||||||| |||||||| | ||| || ||
Sbjct 258 CCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCTCA 317
Query 46290 GTCACGGGACCGCATGTACGTGGTGTTCTGGCGCAGGGGCAACCAGCGTCCCGATGTTGA 46349
||| ||||| | || || || ||
Sbjct 318 ATCAAGGGACAGGATCTATGTCGT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNN 369
Query 46350 CCGGCTGACGCGGCCCGAGGCGGTGTGCCCGACGTGCGGGCAGGTCCGCGTGATGCAGTC 46409
|| || ||| ||||||||| |||| || | |||| | || || |
Sbjct 370 NCG--TG-----------GGCTGTGTGCCCGTCGTGTGGCCCTGTCCAGTCGGTGAAGAC 416
Query 46410 GTGGAAGCTGCCGGAGCGGGCCCCGTGGGGCCGCTACCGCGCCCAGTACGTGTACCGGTG 46469
||||||| |||||||| | ||||||||||||||||||||||||| || | ||
Sbjct 417 CTGGAAGCGCCCGGAGCG---TCAGTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTG 473
Query 46470 CCCG-TCGAC-CACGTGCCGCAACCAGGTCTTGGAGCCGCTGTTCCGTCCGGCCGCCGAG 46527
|||| || | || | || || | ||| |||| || | || || ||||| ||
Sbjct 474 CCCGAACGGCTCATGCGCGGCCA-CAG----TGGAACCCGACTGGCGACCCGCCGCAGAC 528
Query 46528 ATCATCGACTGGTCGCTGTTGGGGCAGCGGATCGGAGACCGGGACAAGCCACTGGCGGAG 46587
|||||||||||||||||| || || ||||| ||||| | || ||||| |||
Sbjct 529 ATCATCGACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGCAAACGCCCGCTGGCCGAG 588
Query 46588 AAGACGATGGCGCGGATCCGGGCCGGCATCGAGCGGTACTGG 46629
||||| ||| | || |||| |||||| ||||| || ||||||
Sbjct 589 AAGACCATGACCCGTATCCAGGCCGGGATCGACCGCTACTGG 630
Score = 122 bits (134), Expect = 3e-23
Identities = 208/296 (70%), Gaps = 33/296 (11%)
Strand=Plus/Plus
Query 46645 CCGGTCGAGGGCCGCGACGGCAAGGCCGCCGCGCCCGTCGATCAGC--CGACCCGCACCA 46702
|| |||||||| ||||| ||||| || ||| ||| || || || || |||||||
Sbjct 733 CCCGTCGAGGGGCGCGAGGGCAAAGCGGCCCTGCCAATC--TCGGCACCGGTACGCACCA 790
Query 46703 TGACGACCCGTAACGAGACTG----GGC--TGCTGGTCCCGACGGGCGGTACGTGGCGCA 46756
|||| ||||| || ||||| | ||| ||||||| || || ||||| ||||||||||
Sbjct 791 TGACCACCCGCAATGAGACCGCCCTGGCGATGCTGGTGCCCACCGGCGGCACGTGGCGCA 850
Query 46757 CCGACGCGA---CGAGCACTGACGATCCGATTCCGACGCGCACCACACGCGAGAACGATG 46813
||||||| | || || |||| || | || || |||||||| || ||||||||
Sbjct 851 CCGACGCAACCCCGGCCAGTGAC---CCCTTCCCCACCCGCACCACTCGGGAGAACGA-- 905
Query 46814 GCCTCGCGTTGGCCCCATTCATCGCGGAGTTGCGCGGCGGCGGGTCCAAGCACCGCCCGG 46873
|||| | | | ||| |||| ||| |||||||| ||| ||| ||||||
Sbjct 906 ----CGCGAT---CGCGTTCGTCGCCGAGCTGCGCGGC----GGTAGCAGCGACGCCCGC 954
Query 46874 TTGATCA----TCCGCTGGCCACGGTCACCGCGTCGGGCACACACCACGGCCTGGT 46925
|||| ||||||||||||||| ||| ||||||| ||||||| |||||
Sbjct 955 GGAATCAGTTCGCCGCTGGCCACGGTCTGCGCTTCGGGCAACCACCACGCGCTGGT 1010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181838111872152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |