Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_004686.1 Length=56276 Score E Sequences producing significant alignments: (Bits) Value seq189415 86.0 2e-12 >seq189415 Length=2896 Score = 86.0 bits (94), Expect = 2e-12 Identities = 133/189 (70%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 39989 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 40048 ||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| ||||| Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511 Query 40049 AGGAAACGCGAAACCC---GCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATG 40105 || | ||| | | || ||||| |||||| ||||| || || || || Sbjct 510 CGG---CTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTG 454 Query 40106 CCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCG 40165 ||| ||| |||||| |||| |||| | |||||| |||| ||||| || |||||||| Sbjct 453 CCTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCG 394 Query 40166 TGAACGCCG 40174 || || || Sbjct 393 GGAGCGTCG 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179369461437348