Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq67190 122 3e-23 >seq67190 Length=2338 Score = 122 bits (134), Expect = 3e-23 Identities = 386/584 (66%), Gaps = 31/584 (5%) Strand=Plus/Plus Query 56709 TCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCC 56768 || |||| || || || |||||||| ||| ||| || |||||| ||||| || | | Sbjct 1440 TCGATGACGAAGGCGACGTAGACGAACCCCGCCCAAGTTGCGACGTAGGTAAAGTCCGAC 1499 Query 56769 ACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCA 56828 ||||||||| || || | || |||||| ||||| ||| | |||| |||| Sbjct 1500 ACCCACAGCATGTTCGGCGCTGGGGCGTAGAACTGCCGGTTGACGTGATCGC--GCGGGC 1557 Query 56829 ACGGC-----TTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAA 56883 ||||| ||| |||||||||||| || ||| || || |||| || || || | Sbjct 1558 ACGGCGCCGCTTTATCGCTGATGGTCGTGCGCACCGGCTTGCCGCGGATTACCCCCGCCA 1617 Query 56884 GTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTA 56943 ||||| | ||| || ||| |||| ||||| | || ||| | || ||||| | Sbjct 1618 AGCCCATCTCGCGCATCAGCCGTTCCACGGTACAGCGCGCGACCGCAAAGCCCTCCCGCA 1677 Query 56944 ACAACTGACGCCAGACTTTACGCACACCGTACACC-TGATGATTTTCATCGTATACGCGC 57002 || ||| |||||||| || ||||| ||||| ||| || | || || || ||||||| Sbjct 1678 TCATCTGCCGCCAGACCTTGCGCACGCCGTAGACCGCGAAG-TTCTCCGCGAATACGCGA 1736 Query 57003 TGTATCTCTCTCTTCAG--CCAGTCGTCGTGCTGCGCACGGGC--ACTGCGTTTATCCGG 57058 ||||| |||| || ||| || | |||| || || || | || || Sbjct 1737 GCGATCTCGGTCTTGAGGATCAG--ATCCTCACGCGCCCGTGCCGACAGACGCGAT--GG 1792 Query 57059 ATGATGTCGCTGTTGCTGAC--AATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTG 57116 || |||||||| || ||| | ||| || || || ||||| || |||| | | | Sbjct 1793 ATCCTGTCGCTG-CGC-GACGTGCTCGTAGTAGGTGGATGGGGCGATCGGCAGGACACGG 1850 Query 57117 CATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCC 57176 || | ||| ||||||| || || || | | || | | | |||| | || Sbjct 1851 CAGATCGGCTCGACCCCATAGGCATCGCGGTGATCGTCAATGAAAGCGATCA---TCGCC 1907 Query 57177 AGA---GGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGT 57233 || ||||||||| |||||||| ||| ||||| || || |||| ||| ||||| |||| Sbjct 1908 GGAACGGGCGGTCGAGCTCCGCCTGCGCGAAATATGCCGATGCCTTGCGCAGGATTTCGT 1967 Query 57234 T--ACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCA 57275 | |||| |||||||| || || ||||||||| | |||| Sbjct 1968 TGGCCTGC--CGCAGTTCGCGGACCTCGCGTTCCAGCGCCTTCA 2009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199857205545921