Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 129 4e-25
seq41046 91.5 9e-14
seq27511 82.4 5e-11
>seq28654
Length=3315
Score = 129 bits (142), Expect = 4e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| || | || || |||||||| ||||| || ||||| | | || || |
Sbjct 2400 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCG 2459
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||||||||||||| || || |||||||| || || | || |||||||| ||
Sbjct 2460 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 2519
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| |||||| ||| ||| || ||| |||| ||| |||| ||| ||
Sbjct 2520 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 2579
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375
||||| |||||||| ||||| || || || ||||| || ||
Sbjct 2580 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 2620
Score = 102 bits (112), Expect = 5e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
||||| || | ||||||||||| || |||||||| ||||||| || | || |||
Sbjct 1038 ACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 1097
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
| ||| || ||| || || | |||||| || || | || || ||||| || || |
Sbjct 1098 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 1157
Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340
||| ||| || ||| ||| ||||| || | ||| |||| |||||| ||||||
Sbjct 1158 ATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTT 1217
Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| ||||| || || ||||||||
Sbjct 1218 CCAGTAAGTGTTTTGACAAATATTTGCAT 1246
Score = 102 bits (112), Expect = 5e-17
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||||||| || | || || ||||| || || |||||||| || ||||| |||||
Sbjct 1931 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 1990
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| | | || || |||||||| || ||| || | |||||| || |||| ||
Sbjct 1991 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 2050
Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||||||||| || | | | || ||| || ||| ||| ||||| | ||
Sbjct 2051 AATGCCTTCTTTGTCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTCAGAAGCTTC 2107
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || | ||| || |||||||| || || ||||| || || ||||||||
Sbjct 2108 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||| || |||| || |||||||| || |||||||||||||||||| || | || ||
Sbjct 1265 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 1324
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279
||||||||||||| ||| || | ||| || ||||| | ||| ||||| || || ||
Sbjct 1325 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 1384
Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339
|| ||| || | | || ||||| |||| || ||||| || || || ||
Sbjct 1385 TATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 1444
Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || | ||||| || || ||||||||
Sbjct 1445 TCCAGTCAATGTTTTGACAAATATTTGCAT 1474
Score = 89.7 bits (98), Expect = 3e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | |||| || ||||| | || ||||||||||| || ||||| |||||
Sbjct 1475 ACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGA 1534
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| || | || || | ||||| ||| ||| || | |||||| || || | |||
Sbjct 1535 CAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGG 1594
Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| || ||||| || |||| ||| ||||| ||| ||| ||||| || |
Sbjct 1595 AATACCCTCTTTATCTTGAATCTTAGCC---TTTACATTTTCAATGGTGTCAGATGGCTC 1651
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||||||||| || || || || || || || || || ||||||||
Sbjct 1652 CACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702
Score = 89.7 bits (98), Expect = 3e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | |||| || | ||| | || ||||| ||||| || ||||| |||||
Sbjct 1703 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 1762
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| || | || ||||||||||| ||| ||| || | ||| ||||| || | ||
Sbjct 1763 GAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 1822
Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||| ||||| || | | | || |||||| ||| ||| || || |||||
Sbjct 1823 GATGCCCTCTTTGTCTTGGATTTTAGC---TTTTACATTTTCAATAGTATCAGAGGGTTC 1879
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || ||||| || || ||||| || ||||| |||||
Sbjct 1880 CACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
>seq41046
Length=7774
Score = 91.5 bits (100), Expect = 9e-14
Identities = 149/213 (70%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||| | ||||||||| || || ||||| || ||||| |||||||| | || || ||
Sbjct 7172 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 7231
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTC 33276
| ||| || ||| ||| || |||||||||||||| | || || ||||| || ||
Sbjct 7232 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 7291
Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336
| | | || ||| || ||| || || || || | || || || || || ||
Sbjct 7292 GATTTTAGC--TTTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGT 7349
Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| |||||||| || || ||||||||||||||
Sbjct 7350 TTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 7382
>seq27511
Length=800
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | ||||| |||| ||||| || || || || || |||||||| |||||
Sbjct 671 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 612
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || || || || | ||||||||| ||| || | | |||||| || | |||
Sbjct 611 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 552
Query 33263 ATGCCTTCTTTTTCGCTAAT---CGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|| || ||||| || ||| ||||| | || ||| ||| || || | ||
Sbjct 551 ATACCCTCTTTATCCTGAATTTTCGCCT---TAACATTTTCAATTGTATCAGAAGCTTCC 495
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| ||| || || || || || || || ||||| |||||||||||
Sbjct 494 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317701104282534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |