Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 215 4e-51
seq28654 98.7 8e-16
seq27511 98.7 8e-16
>seq10526
Length=5062
Score = 215 bits (238), Expect = 4e-51
Identities = 636/971 (65%), Gaps = 31/971 (3%)
Strand=Plus/Plus
Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 101076
|| || || || ||||||| |||||| || | || || || | ||| ||||||||||
Sbjct 3168 TAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 3227
Query 101077 --ATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 101134
| |||||| ||| || | || ||||| ||||| || || || ||||| |||||
Sbjct 3228 GGAATGTTGTCTTCGTAAT--CATGA-ACGCCAGTCCAGCCACGACCATACATAGCAACA 3284
Query 101135 CCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGA---TTTAACAGCGTAA 101191
|| || | ||| || || | || ||||| || ||| | ||| || | |
Sbjct 3285 CCTACTACAATCTTCTTAGGATTCACTCCCTG---CGCCAGCAAGTATTTTACTCCAAAG 3341
Query 101192 TCCGTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCC 101251
|| | |||| || || || ||||| |||||||| | || ||||||| ||
Sbjct 3342 TCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCA 3401
Query 101252 AGATCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGG 101311
||| |||||||| || || ||||| ||||| ||||| | || || | ||| |
Sbjct 3402 AGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATA 3461
Query 101312 AACTTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCA 101371
| ||||| || | | || | || || ||||| || || | ||||| |||
Sbjct 3462 TAATTTTGAGCCTTACCATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCA 3521
Query 101372 CTTGTTAATTCGTATGTTTTGCCCGTTT--GCAGTTGCAACTCGTCCAGCATTGCGCGCA 101429
|||||||||||| | || || | | |||| | ||| || ||||| | || |
Sbjct 3522 GAAGTTAATTCGTATTTCTTACCATTCTTAGCAGAG--AGCTCATCGAGCATCTCACGTA 3579
Query 101430 ATTCTTTCAGTAAAATGTTGTACGTGTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGT 101489
||||||||| ||| | || ||| | || |||| | | ||||| ||||
Sbjct 3580 ATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGT 3636
Query 101490 TGGCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAA 101549
| || ||||| ||||| || |||||||||||||| || || || || || ||||||||
Sbjct 3637 TAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATG 3696
Query 101550 CCTGCAAAAATTCTTTGACAGAATCCACAAACACACGCCGTTTTATC---GCGTCGTGCA 101606
| | ||| || || || || | |||||| ||| || || | | || |
Sbjct 3697 TTAGAAGAAACTCCTTTACTGACTGCACAAAT------CGTGTTCTCTTAGATTTGTCAA 3750
Query 101607 -TATAAT--AGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGT 101663
|| || |||| || |||| | ||||| || || || || || | ||| || | |
Sbjct 3751 CTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATT 3810
Query 101664 GTGGATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCC 101723
|| ||| ||| | ||||| || ||||||||||||||||||||||||||||
Sbjct 3811 CAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCC 3870
Query 101724 AAGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTT 101783
| | ||| | ||||| || |||||||||| ||| ||||| ||||||||||| | ||||
Sbjct 3871 ATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTT 3930
Query 101784 TAAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTT 101843
| || || |||||| || || || || | |||| ||||| || || ||
Sbjct 3931 TGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTT 3990
Query 101844 TGAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTG 101903
| | || |||| ||| || ||||| ||||| || || || ||||| | |||||| |
Sbjct 3991 TTAAACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAG 4050
Query 101904 AGAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTA 101963
|| || || | || | ||||| || || || | | ||| || ||||||||||
Sbjct 4051 TAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTA 4110
Query 101964 CAAAATACGCA 101974
| || || |||
Sbjct 4111 CGAAGTAGGCA 4121
>seq28654
Length=3315
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20012 GTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCC 20071
|||||||||||||| |||||||| || || || | |||||| ||||| ||||||
Sbjct 1962 GTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCTTCTAATTGCTTGCCC 2021
Query 20072 GCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 20131
||| ||||||| | |||||||| || | |||||||||||| ||||| ||||
Sbjct 2022 GCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTC 2081
Query 20132 ACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTT 20191
|| | ||| | || || ||| ||| | ||||| ||||| || || | |||
Sbjct 2082 ACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTT 2141
Query 20192 TTGACAAAAATTTGCAT 20208
|| ||||| ||||||||
Sbjct 2142 TTAACAAAGATTTGCAT 2158
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || || | | ||| ||||| || || |||||||||||||| || || || ||
Sbjct 2386 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 2445
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| ||||||||||| || || || |||| | | |||||||| |
Sbjct 2446 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 2505
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||| ||||| |||||| ||| || | ||| || |||| ||||||
Sbjct 2506 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 2565
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
||||| ||||||||||| || || | ||||| ||||| || ||||||||
Sbjct 2566 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| ||||| | | || || | ||| || ||||| || ||||| |||||||| ||
Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || | |||||||||||| || || ||| | ||||| | ||| ||||| ||
Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||| |||||||| ||||| ||| || | ||| || ||| |||||| |
Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1883
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| ||||||||| || || || | ||||| |||||||| |||||
Sbjct 1884 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058
||| || || || || || ||||| || || |||||||| || ||| | ||||||
Sbjct 1265 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 1324
Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118
|||||| || || ||| |||| || | |||||| || ||| | ||| || || ||
Sbjct 1325 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 1384
Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178
||||| ||| || | | | | || ||||| ||||| ||||||||| ||
Sbjct 1385 TATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 1444
Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| ||||| ||||||||||| ||||||||
Sbjct 1445 TCCAGTCAATGTTTTGACAAATATTTGCAT 1474
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || || | || ||| || |||||||| |||||||| ||||| || || |||||
Sbjct 2160 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAG-- 2217
Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
||| | | | |||||||| |||||| || ||| ||||||||||||||||||| ||
Sbjct 2218 ATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGG 2277
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| || ||| ||||| | | | || ||| || ||
Sbjct 2278 GAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTA 2337
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|| | || |||||||| || || | || || ||||| || ||||||
Sbjct 2338 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 2387
>seq27511
Length=800
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055
|| |||||| || | |||||||| || || || || ||||| || || |||
Sbjct 429 CAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATC 370
Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115
||||| ||||| || ||| |||||||||||||||| || || | ||||||||||||
Sbjct 369 TTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTC 310
Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175
||| ||| || || | | | | ||| || |||| ||||| || || ||
Sbjct 309 TTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGT 250
Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|||||| |||| || || |||||||||||||||
Sbjct 249 TTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418170275398323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |