Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq7533 104 2e-17 >seq7533 Length=2710 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| || ||||||||||| | ||||||||| | |||||| || || |||||| Sbjct 1821 CCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAAT 1762 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT 13330 ||||| |||||||||||||| || || | | ||| ||| | ||| | || || | Sbjct 1761 ATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCG 1702 Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390 ||||||| | ||||||| ||| || | ||||| || | | |||| ||||| || Sbjct 1701 ATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTG 1642 Query 13391 AATAA 13395 ||||| Sbjct 1641 AATAA 1637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429526994388366